Gene EcDH1_3887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3887 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4190229 
End bp4191245 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content55% 
IMG OID 
Productphosphonate ABC transporter, periplasmic phosphonate binding protein 
Protein accessionACX41488 
Protein GI260451066 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCTA AGATAATTGC CTCGCTGGCC TTCACCAGCA TGTTCAGCCT CAGCACCCTG 
TTAAGCCCGG CGCACGCCGA AGAGCAGGAA AAGGCGTTGA ATTTCGGCAT TATTTCAACG
GAATCACAGC AAAACCTGAA ACCGCAATGG ACGCCGTTCT TGCAGGATAT GGAGAAGAAG
CTGGGCGTGA AGGTCAACGC CTTCTTTGCC CCGGACTACG CGGGCATTAT CCAGGGGATG
CGCTTCAATA AAGTGGATAT CGCCTGGTAC GGCAATCTGT CGGCGATGGA AGCGGTGGAT
CGCGCCAATG GCCAGGTCTT CGCCCAGACG GTCGCGGCGG ATGGATCGCC GGGTTACTGG
AGCGTGTTGA TCGTCAACAA AGACAGTCCG ATCAACAACC TGAACGATCT GCTGGCGAAG
CGGAAAGATC TCACCTTTGG CAATGGCGAT CCTAACTCCA CCTCTGGCTT CCTCGTCCCC
GGCTACTACG TCTTCGCCAA AAACAATATC TCCGCCAGCG ACTTCAAGCG CACCGTCAAC
GCCGGGCATG AAACCAACGC GCTGGCCGTC GCCAACAAGC AGGTGGATGT TGCCACCAAC
AACACCGAAA ACCTCGACAA GCTGAAAACC TCCGCGCCAG AGAAGCTGAA AGAACTGAAG
GTGATCTGGA AGTCGCCGCT GATCCCAGGC GATCCGATCG TCTGGCGCAA GAATCTTTCC
GAAACCACCA AAGACAAGAT CTACGACTTC TTTATGAACT ACGGCAAAAC GCCGGAAGAA
AAAGCGGTGC TGGAACGCCT GGGCTGGGCG CCATTCCGCG CTTCCAGCGA CCTGCAACTG
GTGCCGATTC GCCAGCTCGC GCTGTTTAAA GAGATGCAGG GCGTGAAAAG CAATAAAGGA
CTGAATGAGC AGGACAAGCT GGCAAAAACC ACCGAGATTC AGGCGCAGCT GGATGACCTG
GACCGCCTGA ACAACGCGCT AAGCGCGATG AGTTCGGTGA GTAAAGCGGT GCAGTAA
 
Protein sequence
MNAKIIASLA FTSMFSLSTL LSPAHAEEQE KALNFGIIST ESQQNLKPQW TPFLQDMEKK 
LGVKVNAFFA PDYAGIIQGM RFNKVDIAWY GNLSAMEAVD RANGQVFAQT VAADGSPGYW
SVLIVNKDSP INNLNDLLAK RKDLTFGNGD PNSTSGFLVP GYYVFAKNNI SASDFKRTVN
AGHETNALAV ANKQVDVATN NTENLDKLKT SAPEKLKELK VIWKSPLIPG DPIVWRKNLS
ETTKDKIYDF FMNYGKTPEE KAVLERLGWA PFRASSDLQL VPIRQLALFK EMQGVKSNKG
LNEQDKLAKT TEIQAQLDDL DRLNNALSAM SSVSKAVQ