Gene EcDH1_3733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3733 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4022666 
End bp4023664 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content47% 
IMG OID 
Producttranscriptional regulator, LacI family 
Protein accessionACX41338 
Protein GI260450916 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAATC ACAGAATTTC TTTACAGGAT ATCGCTACGC TGGCTGGCGT AACAAAAATG 
ACCGTGAGTC GTTATATCCG CTCGCCGAAA AAGGTGGCAA AGGAAACAGG CGAGCGCATC
GCCAAAATTA TGGAAGAGAT CAATTATATC CCTAATCGCG CTCCCGGCAT GTTGTTGAAT
GCACAAAGTT ATACCCTCGG TATCTTGATT CCGTCATTTC AAAATCAACT CTTCGCTGAC
ATTCTCGCGG GAATAGAATC CGTCACCTCT GAGCATAATT ATCAGACCCT TATTGCTAAT
TACAATTACG ATCGCGATTC CGAAGAAGAG TCGGTGATTA ACCTGCTCTC TTATAACATT
GACGGGATTA TACTTTCGGA AAAATATCAC ACCATCAGGA CGGTGAAATT TCTGCGTTCA
GCCACCATTC CGGTCGTGGA ATTGATGGAT GTACAGGGAG AACGGCTGGA TATGGAGGTC
GGTTTTGATA ATCGGCAGGC CGCTTTTGAC ATGGTGTGTA CCATGCTGGA GAAGCGAGTC
AGGCACAAAA TTCTGTATCT CGGTTCCAAA GATGACACCC GCGATGAACA GCGTTATCAG
GGGTATTGCG ATGCGATGAT GCTGCATAAT CTTTCCCCAT TACGCATGAA TCCACGCGCC
ATCTCATCCA TTCATTTAGG AATGCAGTTA ATGCGTGATG CCCTTAGCGC AAACCCGGAT
TTAGACGGTG TATTTTGCAC CAATGACGAT ATTGCGATGG GTGCGCTTCT GCTGTGCCGC
GAGCGAAACC TCGCCGTGCC AGAACAAATT TCCATTGCGG GTTTTCATGG GCTGGAGATT
GGCAGGCAAA TGATCCCAAG CCTCGCCAGC GTAATTACTC CCCGTTTTGA TATTGGTCGG
ATGGCCGCCC AAATGTTGCT GAGCAAAATT AAAAATAACG ATCACAACCA CAACACTGTT
GACCTCGGGT ATCAGATTTA TCACGGCAAC ACGCTTTAG
 
Protein sequence
MRNHRISLQD IATLAGVTKM TVSRYIRSPK KVAKETGERI AKIMEEINYI PNRAPGMLLN 
AQSYTLGILI PSFQNQLFAD ILAGIESVTS EHNYQTLIAN YNYDRDSEEE SVINLLSYNI
DGIILSEKYH TIRTVKFLRS ATIPVVELMD VQGERLDMEV GFDNRQAAFD MVCTMLEKRV
RHKILYLGSK DDTRDEQRYQ GYCDAMMLHN LSPLRMNPRA ISSIHLGMQL MRDALSANPD
LDGVFCTNDD IAMGALLLCR ERNLAVPEQI SIAGFHGLEI GRQMIPSLAS VITPRFDIGR
MAAQMLLSKI KNNDHNHNTV DLGYQIYHGN TL