| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3707 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 3995570 |
|---|
| End bp | 3996091 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | ACX41315 |
|---|
| Protein GI | 260450893 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.199173 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACC GCGCCACTAC CACAGCTTCC TTAACGTTCG AGTCGCTTTA TGGCACACAT
CACGGCTGGT TGAAAAGCTG GCTGACGCGC AAACTCCAGT CTGCTTTTGA TGCAGATGAC
ATTGCCCAGG ACACTTTTTT GCGGGTAATG GTCAGCGAAA CGCTCTCGAC GATCCGCGAT
CCTCGCTCCT TCCTCTGCAC TATCGCCAAA CGCGTGATGG TGGACCTGTT TCGCCGAAAC
GCGCTGGAAA AAGCGTATCT GGAGATGCTG GCGCTTATGC CGGAGGGGGG AGCGCCTTCA
CCTGAGGAAC GCGAAAGCCA ACTCGAGACC CTACAACTCC TCGACAGCAT GCTGGACGGG
CTAAACGGCA AAACACGTGA AGCGTTTCTG CTTTCGCAAC TGGATGGTCT GACATACAGC
GAGATTGCGC ACAAACTCGG TGTTTCCATC AGCTCCGTGA AAAAATACGT GGCGAAAGCC
GTCGAGCACT GCCTGCTGTT CCGTCTGGAG TATGGGTTAT GA
|
|---|
| Protein sequence | MSDRATTTAS LTFESLYGTH HGWLKSWLTR KLQSAFDADD IAQDTFLRVM VSETLSTIRD
PRSFLCTIAK RVMVDLFRRN ALEKAYLEML ALMPEGGAPS PEERESQLET LQLLDSMLDG
LNGKTREAFL LSQLDGLTYS EIAHKLGVSI SSVKKYVAKA VEHCLLFRLE YGL
|
|---|
| |