Gene EcDH1_3606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3606 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3882507 
End bp3884174 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content55% 
IMG OID 
ProductABC transporter related protein 
Protein accessionACX41219 
Protein GI260450797 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTCAAT TCGTTTATAC CATGCATCGT GTCGGCAAAG TTGTTCCGCC GAAACGTCAT 
ATTTTGAAAA ACATCTCTCT GAGTTTCTTC CCTGGGGCAA AAATTGGTGT CCTGGGTCTG
AATGGCGCGG GTAAGTCCAC CCTGCTGCGC ATTATGGCGG GCATTGATAA AGACATCGAA
GGTGAAGCGC GTCCGCAGCC AGACATCAAG ATTGGTTATC TGCCGCAAGA ACCGCAGCTG
AACCCGGAAC ACACCGTGCG TGAGTCCATT GAAGAAGCGG TTTCAGAAGT GGTTAACGCC
CTGAAACGCC TGGATGAAGT GTATGCGCTG TACGCCGATC CGGATGCCGA TTTTGACAAG
CTGGCCGCTG AACAAGGCCG TCTGGAAGAG ATCATTCAGG CTCACGACGG TCATAATCTG
AACGTACAGC TGGAGCGTGC GGCGGATGCG CTACGTCTGC CGGACTGGGA CGCGAAAATC
GCTAACCTCT CCGGTGGTGA ACGTCGTCGC GTAGCGTTGT GCCGCCTGCT GCTGGAAAAA
CCAGACATGC TGCTGCTCGA CGAACCGACC AACCACCTGG ATGCCGAATC CGTGGCCTGG
CTGGAACGCT TCCTGCACGA CTTCGAAGGC ACCGTTGTGG CGATTACCCA CGACCGTTAC
TTCCTCGATA ACGTTGCAGG CTGGATCCTC GAACTTGACC GCGGTGAAGG TATTCCGTGG
GAAGGTAACT ACTCCTCCTG GCTGGAGCAG AAAGATCAGC GCCTGGCGCA GGAAGCTTCA
CAAGAAGCGG CGCGTCGTAA GTCGATTGAG AAAGAGCTGG AATGGGTACG TCAAGGTACT
AAAGGCCGTC AGTCGAAAGG TAAAGCACGT CTGGCGCGCT TTGAAGAACT GAACAGCACC
GAATATCAGA AACGTAACGA AACCAACGAA CTGTTTATTC CACCTGGACC GCGTCTGGGC
GATAAAGTGC TGGAAGTCAG CAACCTGCGT AAATCCTATG GCGATCGTCT GCTGATTGAT
GACCTGAGCT TCTCGATCCC GAAAGGAGCG ATCGTCGGGA TCATCGGTCC GAACGGTGCG
GGTAAATCGA CCCTGTTCCG TATGATCTCT GGTCAGGAAC AGCCGGACAG CGGCACCATC
ACTTTGGGTG AAACGGTGAA ACTGGCGTCG GTTGATCAGT TCCGTGACTC AATGGATAAC
AGCAAAACCG TTTGGGAAGA AGTTTCCGGC GGGCTGGATA TCATGAAGAT CGGCAACACC
GAGATGCCAA GCCGCGCCTA CGTTGGCCGC TTTAACTTTA AAGGGGTTGA TCAGGGTAAA
CGCGTTGGTG AACTCTCCGG TGGTGAGCGC GGTCGTCTGC ATCTGGCGAA GCTGCTGCAG
GTTGGCGGCA ACATGCTGCT GCTCGACGAA CCAACCAACG ACCTGGATAT CGAAACCCTG
CGCGCGCTGG AAAACGCCCT GCTGGAGTTC CCGGGCTGTG CGATGGTTAT CTCGCACGAC
CGTTGGTTCC TCGACCGTAT CGCCACGCAC ATTCTGGATT ACCAGGATGA AGGTAAAGTT
GAGTTCTTCG AAGGTAACTT TACCGAGTAC GAAGAGTACA AGAAACGCAC GCTGGGCGCA
GACGCGCTGG AGCCGAAGCG TATCAAGTAC AAGCGTATTG CGAAGTAA
 
Protein sequence
MAQFVYTMHR VGKVVPPKRH ILKNISLSFF PGAKIGVLGL NGAGKSTLLR IMAGIDKDIE 
GEARPQPDIK IGYLPQEPQL NPEHTVRESI EEAVSEVVNA LKRLDEVYAL YADPDADFDK
LAAEQGRLEE IIQAHDGHNL NVQLERAADA LRLPDWDAKI ANLSGGERRR VALCRLLLEK
PDMLLLDEPT NHLDAESVAW LERFLHDFEG TVVAITHDRY FLDNVAGWIL ELDRGEGIPW
EGNYSSWLEQ KDQRLAQEAS QEAARRKSIE KELEWVRQGT KGRQSKGKAR LARFEELNST
EYQKRNETNE LFIPPGPRLG DKVLEVSNLR KSYGDRLLID DLSFSIPKGA IVGIIGPNGA
GKSTLFRMIS GQEQPDSGTI TLGETVKLAS VDQFRDSMDN SKTVWEEVSG GLDIMKIGNT
EMPSRAYVGR FNFKGVDQGK RVGELSGGER GRLHLAKLLQ VGGNMLLLDE PTNDLDIETL
RALENALLEF PGCAMVISHD RWFLDRIATH ILDYQDEGKV EFFEGNFTEY EEYKKRTLGA
DALEPKRIKY KRIAK