Gene EcDH1_3466 details

Gene Information

• Locus tag: EcDH1_3466
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: +
• Start bp: 3719778
• End bp: 3720374
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 41%
• Product: putative fimbrial protein
• Protein accession: ACX41081
• Protein GI: 260450659

Plasmid Coverage information

• Num covering plasmid clones: 44
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATCCCA CTCAACGTAA GCTGATGAAG AGAATAATTC TGTTTCTGTC ATTACTGTTT 
TGCATCGCCT GTCCAGCCAT TGCTGGACAG GATATTGACC TTGTTGCCAA TGTAAAAAAC 
AGCACCTGCA AAAGCGGAAT CAGTAACCAG GGTAATATTG ATCTTGGCGT CGTTGGGGTG 
GGATATTTTT CAGGTAATGT TACTCCTGAA AGTTATCAAC CAGGTGGAAA AGAGTTCACT 
ATCACTGTAT CCGACTGTGC ATTACAGGGA ACTGGCGATG TGCTAAATCA GTTACATATT 
GATTTTAGAG CCCTTAGCGG TGTCATGGCT GCTGGCTCTA GGCAAATATT TGCTAATGAA 
ATTTCGTCAG GAGCAAGTAA TGTAGGAGTA GTTATATTTT CTACTCAGGA TTCGGCGAAT 
ACATTCAATG TTCTTAATGC TTCAGGCGGA TCTCGTTCCG TTTATCCAGT AATGTCGGAT 
GACATGAATG GTTCATCCTG GAAATTTAGC ACCCGAATGC AAAAAATCGA TCCTGCATTG 
AGTGTTACAT CTGGTCAACT TATGAGCCAT GTGTTAGTGG ATATTTACTA CGAATAA 

 

Protein sequence

MHPTQRKLMK RIILFLSLLF CIACPAIAGQ DIDLVANVKN STCKSGISNQ GNIDLGVVGV 
GYFSGNVTPE SYQPGGKEFT ITVSDCALQG TGDVLNQLHI DFRALSGVMA AGSRQIFANE 
ISSGASNVGV VIFSTQDSAN TFNVLNASGG SRSVYPVMSD DMNGSSWKFS TRMQKIDPAL 
SVTSGQLMSH VLVDIYYE