Gene EcDH1_3344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3344 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3594507 
End bp3595439 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content60% 
IMG OID 
Producthomocysteine S-methyltransferase 
Protein accessionACX40964 
Protein GI260450542 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCAGA ATAATCCGTT ACGCGCTCTT CTTGATAAAC AGGATATCCT GCTGCTGGAT 
GGCGCGATGG CGACGGAGCT GGAAGCGCGA GGGTGTAACT TAGCCGACAG CCTGTGGTCA
GCCAAAGTGC TGGTAGAAAA CCCGGAGCTT ATCCGCGAAG TGCATCTTGA TTACTACCGG
GCGGAGGCGC AATGCGCGAT CACTGCCAGC TATCAGGCGA CGCCGGCGGG CTTCGCCGCG
CGAGGTCTGG ATGAAGCGCA GTCGAAAGCG CTGATTGGCA AAAGCGTGGA GCTGGCGCGT
AAAGCCCGTG AAGCGTATCT GGCAGAGAAC CCGCAGGCGG GAACGCTTCT GGTGGCGGGA
TCCGTCGGGC CTTACGGCGC GTATCTGGCG GATGGCTCTG AATACCGTGG CGATTATCAT
TGTAGCGTTG AGGCATTTCA GGCGTTTCAT CGCCCGCGCG TGGAAGCCTT GCTGGATGCC
GGGGCCGATC TGCTGGCCTG CGAAACCCTG CCGAATTTTT CCGAGATTGA GGCGTTGGCC
GAGCTGTTGA CCGCATATCC GCGTGCGCGG GCGTGGTTCT CATTTACCCT GCGCGACAGC
GAACACCTGA GCGACGGTAC GCCGCTGCGT GACGTGGTTG CGTTGCTGGC GGGTTATCCG
CAGGTGGTGG CGCTAGGCAT TAACTGTATT GCGCTGGAAA ACACCACCGC TGCGTTGCAG
CATTTACACG GTTTAACGGT GCTGCCGCTG GTGGTGTATC CGAACTCGGG CGAGCATTAC
GATGCCGTGA GCAAAACCTG GCATCATCAC GGTGAACATT GCGCGCAGCT GGCGGATTAT
CTGCCGCAGT GGCAGGCCGC TGGCGCACGG TTGATTGGCG GGTGCTGTCG CACCACGCCT
GCGGATATCG CCGCGTTAAA AGCGCGAAGC TGA
 
Protein sequence
MSQNNPLRAL LDKQDILLLD GAMATELEAR GCNLADSLWS AKVLVENPEL IREVHLDYYR 
AEAQCAITAS YQATPAGFAA RGLDEAQSKA LIGKSVELAR KAREAYLAEN PQAGTLLVAG
SVGPYGAYLA DGSEYRGDYH CSVEAFQAFH RPRVEALLDA GADLLACETL PNFSEIEALA
ELLTAYPRAR AWFSFTLRDS EHLSDGTPLR DVVALLAGYP QVVALGINCI ALENTTAALQ
HLHGLTVLPL VVYPNSGEHY DAVSKTWHHH GEHCAQLADY LPQWQAAGAR LIGGCCRTTP
ADIAALKARS