| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3273 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 3519774 |
|---|
| End bp | 3520943 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | 2-methylcitrate synthase/citrate synthase II |
|---|
| Protein accession | ACX40897 |
|---|
| Protein GI | 260450475 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA CAACGATCCT GCAAAACAGT ACCCATGTCA TTAAACCGAA AAAATCTGTG
GCACTTTCTG GCGTTCCGGC GGGCAATACG GCGCTCTGCA CCGTGGGTAA AAGTGGCAAT
GACCTGCATT ACCGCGGCTA CGATATTCTT GATCTGGCGA AACATTGCGA ATTTGAAGAA
GTGGCGCATC TGCTGATCCA CGGCAAACTG CCGACCCGTG ACGAACTCGC CGCTTACAAA
ACGAAACTGA AAGCCCTGCG CGGTTTACCG GCTAACGTGC GTACCGTGCT GGAAGCCTTA
CCGGCGGCGT CGCACCCGAT GGATGTTATG CGCACCGGTG TTTCCGCGCT CGGCTGCACG
CTGCCAGAAA AAGAGGGGCA TACCGTCTCT GGCGCGCGGG ATATTGCCGA CAAACTGCTG
GCGTCGCTTA GCTCGATTCT CCTTTATTGG TATCACTACA GCCACAACGG CGAACGCATC
CAACCGGAAA CCGATGACGA CTCCATCGGC GGTCACTTCC TGCATCTGCT GCACGGCGAA
AAGCCATCGC AAAGCTGGGA AAAGGCGATG CATATCTCGC TGGTGCTGTA CGCCGAACAC
GAGTTTAACG CCTCCACCTT TACCAGTCGG GTGATTGCGG GCACCGGCTC TGATATGTAT
TCCGCGATTA TTGGCGCGAT TGGCGCACTG CGCGGGCCAA AACACGGCGG GGCGAATGAA
GTGTCGCTGG AGATCCAGCA ACGCTACGAA ACGCCGGACG AAGCCGAAGC AGATATCCGC
AAGCGCGTGG AAAACAAAGA AGTGGTCATT GGTTTTGGTC ATCCGGTTTA CACCATCGCT
GACCCGCGCC ACCAGGTGAT TAAACGTGTG GCGAAGCAGC TCTCGCAGGA AGGCGGCTCG
CTGAAGATGT ACAACATCGC CGATCGCCTG GAAACGGTGA TGTGGGAGAG CAAAAAGATG
TTCCCCAATC TCGACTGGTT CTCTGCTGTT TCCTACAACA TGATGGGCGT TCCCACCGAG
ATGTTCACAC CACTGTTTGT TATCGCCCGC GTCACCGGCT GGGCGGCGCA CATTATCGAA
CAACGTCAGG ACAACAAAAT TATCCGTCCT TCCGCCAATT ATGTTGGACC GGAAGACCGC
CCGTTTGTCG CGCTGGATAA GCGCCAGTAA
|
|---|
| Protein sequence | MSDTTILQNS THVIKPKKSV ALSGVPAGNT ALCTVGKSGN DLHYRGYDIL DLAKHCEFEE
VAHLLIHGKL PTRDELAAYK TKLKALRGLP ANVRTVLEAL PAASHPMDVM RTGVSALGCT
LPEKEGHTVS GARDIADKLL ASLSSILLYW YHYSHNGERI QPETDDDSIG GHFLHLLHGE
KPSQSWEKAM HISLVLYAEH EFNASTFTSR VIAGTGSDMY SAIIGAIGAL RGPKHGGANE
VSLEIQQRYE TPDEAEADIR KRVENKEVVI GFGHPVYTIA DPRHQVIKRV AKQLSQEGGS
LKMYNIADRL ETVMWESKKM FPNLDWFSAV SYNMMGVPTE MFTPLFVIAR VTGWAAHIIE
QRQDNKIIRP SANYVGPEDR PFVALDKRQ
|
|---|
| |