Gene EcDH1_3260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3260 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3502523 
End bp3503368 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content55% 
IMG OID 
Producttranscriptional regulator, IclR family 
Protein accessionACX40884 
Protein GI260450462 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0000124832 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATTA ATATGCAGAA CAATGAGCAG ACGGAATACA AAACCGTGCG CGGCTTAACC 
CGCGGTCTAA TGTTATTAAA TATGTTAAAT AAACTTGATG GCGGTGCCAG CGTCGGGCTG
CTGGCGGAAC TCAGCGGCCT GCATCGCACC ACTGTGCGGC GACTGCTGGA GACGCTGCAG
GAAGAGGGAT ATGTCCGCCG TAGCCCCTCC GATGATAGTT TTCGACTGAC CATCAAAGTG
CGGCAATTAA GCGAAGGATT TCGTGACGAA CAGTGGATTT CTGCACTGGC GGCCCCACTG
CTGGGCGATC TGTTGCGCGA AGTGGTATGG CCGACAGATG TGTCCACGCT GGATGTTGAT
GCAATGGTGG TACGCGAAAC CACTCACCGT TTCAGCCGCT TATCCTTTCA CCGGGCAATG
GTCGGGCGAC GTTTGCCGCT TCTGAAAACC GCCTCGGGCC TGACCTGGCT GGCCTTTTGC
CCGGAACAAG ACCGCAAGGA ATTAATCGAA ATGTTAGCCT CCCGCCCCGG TGATGACTAT
CAACTGGCAC GGGAACCGTT AAAGCTGGAA GCCATTCTGG CGCGCGCGCG CAAAGAGGGT
TACGGACAGA ACTACCGCGG TTGGGATCAG GAGGAGAAGA TCGCCTCTAT CGCCGTACCG
CTGCGCAGTG AACAACGGGT GATTGGCTGT CTGAATCTGG TGTATATGGC GAGCGCAATG
ACCATTGAAC AGGCAGCGGA AAAGCATCTT CCGGCGCTAC AACGGGTAGC AAAACAGATC
GAAGAAGGGG TTGAATCGCA GGCTATTCTG GTGGCCGGAA GGCGAAGCGG CATGCATTTA
CGTTGA
 
Protein sequence
MSINMQNNEQ TEYKTVRGLT RGLMLLNMLN KLDGGASVGL LAELSGLHRT TVRRLLETLQ 
EEGYVRRSPS DDSFRLTIKV RQLSEGFRDE QWISALAAPL LGDLLREVVW PTDVSTLDVD
AMVVRETTHR FSRLSFHRAM VGRRLPLLKT ASGLTWLAFC PEQDRKELIE MLASRPGDDY
QLAREPLKLE AILARARKEG YGQNYRGWDQ EEKIASIAVP LRSEQRVIGC LNLVYMASAM
TIEQAAEKHL PALQRVAKQI EEGVESQAIL VAGRRSGMHL R