Gene EcDH1_2979 details

Gene Information

• Locus tag: EcDH1_2979
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: +
• Start bp: 3201713
• End bp: 3202267
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 43%
• Product: Sel1 domain protein repeat-containing protein
• Protein accession: ACX40608
• Protein GI: 260450186

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAA AATTAATGTA TATATTCGCA ATTTTTATAG TTGCAGCAAT TACCTGTATT 
AGCCAACCCA AGAAAACGAC GTTGCGTGAT AAAGCCATGG TGAATTATGC CTTTGATTAT 
TTAAGCTCAC CGGGCAGTCT TCCATTCACC ACGGCAGCCA CGGAGCTTTC CGCGATTCAT 
GGTCACTCAA CGTCGCAATA TCGCCTTGGA GAATTTTATC TTCATGGTAG CGACGGTAAA 
CCACTGGATT ATACACAGGC GAGATACTGG TATGAGCAAT CAGCGGAACA GGAAAATCCA 
CGCGCGCAAA GTAAACTGGG GTGGATCTAC CTCAAAGGTC TGGGGGTCAA ACCCGACACC 
CGTAAAGCAA TTCTCTGGTA TAAGGAAGCA GCTGAACAAG GGTATGCTCA TGCTCAATAT 
ACTTTAGGTT TGATCTACAG AAATGGCTCA GGTATTAATG TTAACCATTA TGAATCTCAA 
AAATGGTTAA AACTGACCGC CAAACAACAT TACAAAAATG CGGAAAGATT ACTTGCCGGG 
CTTCCCGCAC ATTAA 

 

Protein sequence

MNKKLMYIFA IFIVAAITCI SQPKKTTLRD KAMVNYAFDY LSSPGSLPFT TAATELSAIH 
GHSTSQYRLG EFYLHGSDGK PLDYTQARYW YEQSAEQENP RAQSKLGWIY LKGLGVKPDT 
RKAILWYKEA AEQGYAHAQY TLGLIYRNGS GINVNHYESQ KWLKLTAKQH YKNAERLLAG 
LPAH