Gene EcDH1_2978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2978 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3200904 
End bp3201611 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content48% 
IMG OID 
Productprotein of unknown function DUF1266 
Protein accessionACX40607 
Protein GI260450185 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGG AAGAACAATA TCTTCTTTTT GCGCTTTCTG CGCCCATGGA AATACTTAAT 
CAGGGTTGCA AACCCGCGCA TGACTCGCCA AAAATGTATA CTGGGATAAA AGAATTCGAG
CTCTCATCAT CCTGGGGAAT AAATAATCGT GATGATTTAA TTCAGACTAT TTATCAGATG
ACTGATGATG GTCATGCCAA TGATTTAGCT GGCTTATATC TGACATGGCA TCGCTCTTCC
CCTGAAGAGT GGAAAGCATT AATTGCTGGT GGCTCGGAGA GAGGGTTGAT TTATACCCAA
TTCGTTGCCC AAACCGCTAT GTGCTGTGGG GAAGGGGGAA TCAAAGCCTG GGATTATGTT
CGAATGGGGT TTCTGTCACG GGTCGGTGTG CTCAACAAGT GGCTGACGGA AGAAGAGAGT
TTATGGCTGC AATCGCGCGT CTATGTACGA GCTCACCATT ACTATCACAG CTGGATGCAC
TATTTTTCCG CCTATTCGTT AGGACGTCTC TACTGGCAAT CTTCTCAGTG CGAAGACAAC
ACTTCGCTAC GCGAGGCGCT AACCCTGTAC AAATACGATA GCGCCGGGAG TCGTATGTTC
GAAGAGCTGG CAGCGGGAAG CGATCGTTTC TATGCCACGC TTCCCTGGCA GCCATTAACT
GTCCAGTCTG AATGCCCGGT AACGCTTAAG GATGTGAGCG ACCTATGA
 
Protein sequence
MNKEEQYLLF ALSAPMEILN QGCKPAHDSP KMYTGIKEFE LSSSWGINNR DDLIQTIYQM 
TDDGHANDLA GLYLTWHRSS PEEWKALIAG GSERGLIYTQ FVAQTAMCCG EGGIKAWDYV
RMGFLSRVGV LNKWLTEEES LWLQSRVYVR AHHYYHSWMH YFSAYSLGRL YWQSSQCEDN
TSLREALTLY KYDSAGSRMF EELAAGSDRF YATLPWQPLT VQSECPVTLK DVSDL