Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_2809 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 3005792 |
End bp | 3008140 |
Gene Length | 2349 bp |
Protein Length | 782 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | |
Product | diguanylate phosphodiesterase |
Protein accession | ACX40442 |
Protein GI | 260450020 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.473274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAGTT TATACGAAAA GATAAAGATA AGGCTGATAA TTTTATTTTT ATTGGCAGCA CTGTCATTTA TTGGTCTTTT TTTCATCATT AACTATCAAC TGGTATCGGA GCGCGCGGTA AAACGTGCCG ATAGCCGCTT TGAACTTATT CAGAAAAACG TTGGCTATTT CTTTAAAGAT ATTGAACGTT CGGCCCTGAC ATTAAAGGAC TCACTGTATT TATTAAAAAA TACAGAGGAG ATTCAACGCG CCGTGATTCT TAAAATGGAA ATGATGCCAT TTTTAGACTC GGTGGGACTG GTACTTGATG ATAATAAATA TTATCTTTTT TCGCGGAGGG CGAATGATAA AATCGTTGTT TATCATCAGG AACAAGTAAA TGGACCGCTT GTCGACGAGT CAGGGCGGGT TATTTTTGCC GATTTTAACC CATCGAAACG ACCGTGGTCG GTGGCTTCAG ATGACTCTAA CAACAGCTGG AATCCGGCAT ACAATTGCTT TGATCGTCCG GGTAAAAAAT GTATCTCTTT TACGCTACAC ATCAACGGCA AAGATCACGA TTTGTTAGCG GTGGATAAAA TTCATGTCGA TTTAAACTGG CGATATCTGA ACGAGTATCT TGATCAAATC AGCGCTAATG ATGAAGTTCT ATTTTTGAAA CAAGGCCATG AGATCATTGC CAAGAATCAA CTCGCTCGTG AAAAACTGAT TATTTATAAT AGCGAAGGTA ATTATAATAT TATTGATTCT GTCGATACTG AATATATCGA AAAAACATCA GCGGTGCCAA ACAACGCATT ATTCGAAATC TATTTTTATT ATCCTGGCGG TAATTTATTG AACGCATCAG ATAAACTTTT TTATCTGCCG TTTGCGTTCA TTATTATCGT ATTGCTGGTG GTTTATTTAA TGACCACTCG TGTGTTCCGT CGGCAATTTT CTGAAATGAC AGAGCTGGTT AATACGCTGG CGTTTTTGCC TGACTCAACG GATCAAATCG AGGCTCTGAA AATTCGTGAA GGCGATGCGA AAGAGATTAT CAGCATCAAA AATTCGATCG CGGAAATGAA AGATGCCGAA ATTGAACGGT CAAATAAATT GCTCTCACTG ATCTCTTACG ATCAGGAAAG TGGTTTTATT AAAAATATGG CGATTATTGA GTCTAACAAT AATCAGTATC TGGCTGTGGG GATCATCAAA CTGTGTGGTC TGGAAGCCGT GGAAGCGGTG TTTGGTGTTG ATGAGCGCAA TAAAATCGTC AGGAAATTGT GTCAGCGAAT TGCCGAGAAA TATGCGCAAT GCTGCGATAT CGTGACATTC AATGCCGATC TCTATTTACT TCTGTGTCGG GAAAATGTAC AGACATTTAC CCGTAAAATA GCGATGGTAA ACGATTTTGA CAGCAGCTTT GGCTACCGCA ATCTGCGCAT CCATAAGTCT GCCATTTGTG AACCTTTGCA GGGGGAAAAC GCCTGGAGTT ACGCAGAAAA ACTGAAACTG GCGATTTCCA GTATCCGTGA CCATATGTTC TCAGAGTTTA TTTTCTGTGA TGACGCGAAA CTCAACGAAA TAGAAGAGAA TATCTGGATT GCGCGTAATA TTCGCCATGC AATGGAAATT GGCGAACTAT TCCTCGTCTA TCAACCGATC GTTGATATTA ACACCCGCGC CATTCTGGGC GCGGAGGCGT TGTGCCGTTG GGTGTCTGCG GAGCGGGGGA TCATTTCACC GCTGAAGTTC ATTACCATTG CTGAAGATAT CGGGTTTATC AATGAGCTGG GTTATCAGAT TATTAAAACG GCAATGGGTG AATTCAGACA TTTTAGTCAG CGTGCGTCGC TGAAGGATGA TTTCTTACTG CATATTAATG TTTCGCCCTG GCAGTTAAAC GAACCACACT TTCATGAGCG TTTTACCACC ATCATGAAAG AAAATGGCCT GAAGGCGAAC AGCCTCTGTG TTGAGATCAC TGAAACCGTG ATCGAGCGAA TTAATGAACA TTTTTATCTC AATATTGAAC AACTGCGTAA ACAAGGGGTA CGGATATCGA TTGATGACTT TGGCACCGGT TTGTCAAACC TGAAACGTTT TTATGAAATT AATCCAGACA GCATAAAGGT GGACTCGCAA TTCACCGGCG ATATTTTCGG TACTGCGGGA AAAATTGTGC GCATTATTTT CGACCTGGCA CGCTATAACC GGATCCCGGT GATTGCGGAA GGCGTAGAGA GCGAAGACGT TGCGCGCGAA TTAATCAAAT TAGGATGTGT TCAGGCTCAG GGGTATCTGT ACCAGAAACC CATGCCATTC TCCGCCTGGG ATAAAAGTGG AAAATTAGTA AAAGAGTAG
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Protein sequence | MLSLYEKIKI RLIILFLLAA LSFIGLFFII NYQLVSERAV KRADSRFELI QKNVGYFFKD IERSALTLKD SLYLLKNTEE IQRAVILKME MMPFLDSVGL VLDDNKYYLF SRRANDKIVV YHQEQVNGPL VDESGRVIFA DFNPSKRPWS VASDDSNNSW NPAYNCFDRP GKKCISFTLH INGKDHDLLA VDKIHVDLNW RYLNEYLDQI SANDEVLFLK QGHEIIAKNQ LAREKLIIYN SEGNYNIIDS VDTEYIEKTS AVPNNALFEI YFYYPGGNLL NASDKLFYLP FAFIIIVLLV VYLMTTRVFR RQFSEMTELV NTLAFLPDST DQIEALKIRE GDAKEIISIK NSIAEMKDAE IERSNKLLSL ISYDQESGFI KNMAIIESNN NQYLAVGIIK LCGLEAVEAV FGVDERNKIV RKLCQRIAEK YAQCCDIVTF NADLYLLLCR ENVQTFTRKI AMVNDFDSSF GYRNLRIHKS AICEPLQGEN AWSYAEKLKL AISSIRDHMF SEFIFCDDAK LNEIEENIWI ARNIRHAMEI GELFLVYQPI VDINTRAILG AEALCRWVSA ERGIISPLKF ITIAEDIGFI NELGYQIIKT AMGEFRHFSQ RASLKDDFLL HINVSPWQLN EPHFHERFTT IMKENGLKAN SLCVEITETV IERINEHFYL NIEQLRKQGV RISIDDFGTG LSNLKRFYEI NPDSIKVDSQ FTGDIFGTAG KIVRIIFDLA RYNRIPVIAE GVESEDVARE LIKLGCVQAQ GYLYQKPMPF SAWDKSGKLV KE
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