Gene EcDH1_2705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2705 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2882712 
End bp2883251 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content42% 
IMG OID 
ProductFimbrial protein 
Protein accessionACX40338 
Protein GI260449916 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0296528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA GTGTATTGAC GGCGTTTATA ACTGTGGTAT GTGCAACGTC CAGCGTTATG 
GCTGCTGATG ATAATGCTAT CACGGATGGC TCAGTAACAT TTAATGGTAA AGTTATTGCT
CCAGCTTGTA CCCTGGTAGC TGCGACGAAA GATTCCGTGG TGACTTTGCC AGATGTTAGT
GCCACGAAGT TGCAAACCAA TGGTCAGGTT TCTGGCGTGC AAATTGATGT GCCAATTGAA
TTAAAAGATT GTGATACTAC CGTAACAAAA AATGCAACGT TCACCTTTAA TGGCACTGCG
GATACTACTC AGATTACAGC GTTTGCTAAC CAGGCCTCAT CTGATGCTGC TACAAACGTG
GCCCTGCAAA TGTATATGAA TGATGGTACA ACGGCCATCA CGCCAGACAC AGAAACCGGG
AACATTTTGT TGCAGGATGG AGATCAGACG TTGACTTTTA AAGTTGATTA TATCGCTACG
GGGAAAGCGA CTTCAGGTAA TGTGAATGCG GTAACAAATT TCCATATTAA CTATTATTAA
 
Protein sequence
MKKSVLTAFI TVVCATSSVM AADDNAITDG SVTFNGKVIA PACTLVAATK DSVVTLPDVS 
ATKLQTNGQV SGVQIDVPIE LKDCDTTVTK NATFTFNGTA DTTQITAFAN QASSDAATNV
ALQMYMNDGT TAITPDTETG NILLQDGDQT LTFKVDYIAT GKATSGNVNA VTNFHINYY