Gene EcDH1_2387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2387 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2561262 
End bp2562455 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content55% 
IMG OID 
Producttryptophan synthase, beta subunit 
Protein accessionACX40030 
Protein GI260449608 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.532965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACAT TACTTAACCC CTATTTTGGT GAGTTTGGCG GCATGTACGT GCCACAAATC 
CTGATGCCTG CTCTGCGCCA GCTGGAAGAA GCTTTTGTCA GTGCGCAAAA AGATCCTGAA
TTTCAGGCTC AGTTCAACGA CCTGCTGAAA AACTATGCCG GGCGTCCAAC CGCGCTGACC
AAATGCCAGA ACATTACAGC CGGGACGAAC ACCACGCTGT ATCTCAAGCG TGAAGATTTG
CTGCACGGCG GCGCGCATAA AACTAACCAG GTGCTGGGGC AGGCGTTGCT GGCGAAGCGG
ATGGGTAAAA CCGAAATCAT CGCCGAAACC GGTGCCGGTC AGCATGGCGT GGCGTCGGCC
CTTGCCAGCG CCCTGCTCGG CCTGAAATGC CGTATTTATA TGGGTGCCAA AGACGTTGAA
CGCCAGTCGC CTAACGTTTT TCGTATGCGC TTAATGGGTG CGGAAGTGAT CCCGGTGCAT
AGCGGTTCCG CGACGCTGAA AGATGCCTGT AACGAGGCGC TGCGCGACTG GTCCGGTAGT
TACGAAACCG CGCACTATAT GCTGGGCACC GCAGCTGGCC CGCATCCTTA TCCGACCATT
GTGCGTGAGT TTCAGCGGAT GATTGGCGAA GAAACCAAAG CGCAGATTCT GGAAAGAGAA
GGTCGCCTGC CGGATGCCGT TATCGCCTGT GTTGGCGGCG GTTCGAATGC CATCGGCATG
TTTGCTGATT TCATCAATGA AACCAACGTC GGCCTGATTG GTGTGGAGCC AGGTGGTCAC
GGTATCGAAA CTGGCGAGCA CGGCGCACCG CTAAAACATG GTCGCGTGGG TATCTATTTC
GGTATGAAAG CGCCGATGAT GCAAACCGAA GACGGGCAGA TTGAAGAATC TTACTCCATC
TCCGCCGGAC TGGATTTCCC GTCTGTCGGC CCACAACACG CGTATCTTAA CAGCACTGGA
CGCGCTGATT ACGTGTCTAT TACCGATGAT GAAGCCCTTG AAGCCTTCAA AACGCTGTGC
CTGCACGAAG GGATCATCCC GGCGCTGGAA TCCTCCCACG CCCTGGCCCA TGCGTTGAAA
ATGATGCGCG AAAACCCGGA TAAAGAGCAG CTACTGGTGG TTAACCTTTC CGGTCGCGGC
GATAAAGACA TCTTCACCGT TCACGATATT TTGAAAGCAC GAGGGGAAAT CTGA
 
Protein sequence
MTTLLNPYFG EFGGMYVPQI LMPALRQLEE AFVSAQKDPE FQAQFNDLLK NYAGRPTALT 
KCQNITAGTN TTLYLKREDL LHGGAHKTNQ VLGQALLAKR MGKTEIIAET GAGQHGVASA
LASALLGLKC RIYMGAKDVE RQSPNVFRMR LMGAEVIPVH SGSATLKDAC NEALRDWSGS
YETAHYMLGT AAGPHPYPTI VREFQRMIGE ETKAQILERE GRLPDAVIAC VGGGSNAIGM
FADFINETNV GLIGVEPGGH GIETGEHGAP LKHGRVGIYF GMKAPMMQTE DGQIEESYSI
SAGLDFPSVG PQHAYLNSTG RADYVSITDD EALEAFKTLC LHEGIIPALE SSHALAHALK
MMRENPDKEQ LLVVNLSGRG DKDIFTVHDI LKARGEI