Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_2381 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 2553036 |
End bp | 2554931 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | conserved hypothetical protein |
Protein accession | ACX40024 |
Protein GI | 260449602 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0833441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAGGGA AGTTTCGCTG CATTTTGCTG TTGATAGCAG GGCTGTTTGT ATCATCTCTA AGTTATGCAG AAAACACGGA GATCCCTTCT TATGAAGAAG GGATCTCGCT CTTTGATGTT GAAGCCACTC TGCAACCAGA TGGGGTGCTC GACATCAAAG AAAATATTCA TTTTCAGGCG CGAAATCAGC AGATTAAGCA CGGCTTTTAT CGTGATTTAC CACGACTATG GATGCAGCCT GATGGGGACG CTGCACTGCT GAACTATCAT ATTGTTGGCG TCACCCGTGA TGGTATTCCT GAACCCTGGC ATCTTGACTG GCATATCGGG TTAATGAGTA TTGTCGTGGG CGATAAACAA CGTTTCTTGC CTCAAGGCGA CTATCATTAT CAAATTCATT ATCAGGTTAA AAATGCTTTC CTGCGTGAGG GGGATTCTGA TCTGCTAATC TGGAACGTGA CCGGTAACCA CTGGCCGTTT GAAATTTATA AGACCCGTTT TTCTCTCCAG TTCTCTAATA TTGCGGGTAA TCCATTTAGC GAAATCGATC TTTTTACCGG AGAAGAGGGC GACACATATC GTAATGGCCG CATCCTTGAG GACGGAAGAA TTGAATCCCG CGATCCGTTT TATCGTGAAG ATTTCACGGT CCTCTACCGC TGGCCTCACG CTTTACTTAG CAATGCCTCG GCTCCGCAAA CGACGAATAT TTTCAGCCAT CTTCTTTTAC CCTCCACGTC ATCGTTGTTA ATTTGGTTTC CGTGTCTGTT CCTGGTTTGT GGATGGTTAT ATCTCTGGAA GCGCAGGCCG CAATTTACGC CGGTAGATGT GATTGAAACC GATGTCATTC CGCCAGATTA CACGCCCGGC ATGTTACGTC TCGATGCGAA GCTAGTTTAC GACGATAAAG GTTTTTGTGC CGATATCGTA AATCTGATTG TGAAAGGAAA AATTCATCTG GAAGATCAGT CTGACAAGAA CCAGCAAATC CTGATTCGTG TTAATGAAGG CGCGACCAGA AATAATGCGG TATTACTGCC CGCAGAGCAG TTATTACTGG AAGCGTTATT TCGTAAAGGC GATAAGGTCG TTCTTACGGG GAGACGCAAC AGAGTCTTAC GCAGGGCATT TTTACGGATG CAGAAATTTT ATCTGCCGCG TAAAAAGTCT TCGTTTTACC GGTCTGATAC TTTTTTGCAA TGGGGTGGAC TGGCAATATT GGCGGTCATT CTTTACGGTA ACTTGAGTCC TGTAGGCTGG GCAGGAATGA GTCTGGTGGG CGATATGTTT ATTATGATCT GCTGGATTAT TCCTTTTTTA TTTTGTTCCC TTGAGCTTTT GTTTGCCCGC GATGATGACA AGCCTTGCGT TAATCGTGTA ATCATCACTT TGTTTTTACC ACTGATTTGT TCAGGCGTGG CCTTCTATTC TCTCTACATC AATGTCGGAG ATGTATTCTT TTACTGGTAT ATGCCAGCGG GTTATTTTAC CGCTGTTTGC CTGACCGGTT ATCTCACTGG CATGGGGTAT ATTTTTCTGC CAAAGTTTAC CCAAACTGGA CAGCAACGTT ATGCCCACGG TGAAGCTATC GTTAACTATC TTGCGCGTAA AGAGGCAGCA ACACACAGTG GACGTCGGCG GAAAGGGGAA ACACGGAAAC TGGATTACGC GTTGCTAGGT TGGGCTATAT CGGCAAATTT GGGGAGGGAA TGGGCGTTAC GCATTGCCCC TTCGCTTTCT TCGGCGATTC GCGCTCCAGA GATTGCCCGT AACGGCGTTT TATTCTCATT ACAGACGCAC CTAAGTTGCG GGGCCAATAC CAGTTTGTTG GGGCGAAGTT ATTCCGGTGG TGGTGCTGGC GGCGGCGCGG GTGGCGGAGG CGGTGGTGGC TGGTAA
|
Protein sequence | MAGKFRCILL LIAGLFVSSL SYAENTEIPS YEEGISLFDV EATLQPDGVL DIKENIHFQA RNQQIKHGFY RDLPRLWMQP DGDAALLNYH IVGVTRDGIP EPWHLDWHIG LMSIVVGDKQ RFLPQGDYHY QIHYQVKNAF LREGDSDLLI WNVTGNHWPF EIYKTRFSLQ FSNIAGNPFS EIDLFTGEEG DTYRNGRILE DGRIESRDPF YREDFTVLYR WPHALLSNAS APQTTNIFSH LLLPSTSSLL IWFPCLFLVC GWLYLWKRRP QFTPVDVIET DVIPPDYTPG MLRLDAKLVY DDKGFCADIV NLIVKGKIHL EDQSDKNQQI LIRVNEGATR NNAVLLPAEQ LLLEALFRKG DKVVLTGRRN RVLRRAFLRM QKFYLPRKKS SFYRSDTFLQ WGGLAILAVI LYGNLSPVGW AGMSLVGDMF IMICWIIPFL FCSLELLFAR DDDKPCVNRV IITLFLPLIC SGVAFYSLYI NVGDVFFYWY MPAGYFTAVC LTGYLTGMGY IFLPKFTQTG QQRYAHGEAI VNYLARKEAA THSGRRRKGE TRKLDYALLG WAISANLGRE WALRIAPSLS SAIRAPEIAR NGVLFSLQTH LSCGANTSLL GRSYSGGGAG GGAGGGGGGG W
|
| |