Gene EcDH1_2340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2340 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2510293 
End bp2510652 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content50% 
IMG OID 
Productphage shock protein C, PspC 
Protein accessionACX39983 
Protein GI260449561 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00136748 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGCA TTAATCTCAA TAAAAAATTA TGGCGTATTC CACAGCAGGG CATGGTCCGC 
GGCGTCTGCG CCGGGATTGC CAACTATTTT GATGTACCGG TAAAACTGGT GCGTATCCTG
GTGGTGCTGT CGATTTTCTT CGGTCTGGCG CTGTTTACCC TGGTTGCTTA CATCATTTTG
TCATTTGCGC TTGATCCAAT GCCGGACAAC ATGGCCTTTG GTGAGCAGCT ACCTTCCAGC
AGCGAATTGC TGGATGAAGT CGACCGTGAA CTGGCGGCAA GTGAAACGCG TTTACGCGAG
ATGGAACGTT ATGTCACTTC CGATACTTTC ACGTTACGTA GCCGTTTCCG TCAACTGTGA
 
Protein sequence
MAGINLNKKL WRIPQQGMVR GVCAGIANYF DVPVKLVRIL VVLSIFFGLA LFTLVAYIIL 
SFALDPMPDN MAFGEQLPSS SELLDEVDRE LAASETRLRE MERYVTSDTF TLRSRFRQL