Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_2258 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 2424836 |
End bp | 2426881 |
Gene Length | 2046 bp |
Protein Length | 681 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | phenylacetic acid degradation protein paaN |
Protein accession | ACX39905 |
Protein GI | 260449483 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCAGT TAGCCAGTTT CTTATCCGGT ACCTGGCAGT CTGGCCGGGG CCGTAGCCGT TTGATTCACC ACGCTATTAG CGGCGAGGCG TTATGGGAAG TGACCAGTGA AGGTCTTGAT ATGGCGGCTG CCCGCCAGTT TGCCATTGAA AAAGGTGCCC CCGCCCTTCG CGCTATGACC TTTATCGAAC GTGCGGCGAT GCTTAAAGCG GTCGCTAAAC ATCTGCTGAG TGAAAAAGAG CGTTTCTATG CTCTTTCTGC GCAAACAGGC GCAACGCGGG CAGACAGTTG GGTTGATATT GAAGGTGGCA TTGGGACGTT ATTTACTTAC GCCAGCCTCG GTAGCCGGGA GCTGCCTGAC GATACGCTGT GGCCGGAAGA TGAATTGATC CCCTTATCGA AAGAAGGTGG ATTTGCCGCG CGCCATTTAC TGACCTCAAA GTCAGGCGTG GCAGTGCATA TTAACGCCTT TAACTTCCCC TGCTGGGGAA TGCTGGAAAA GCTGGCACCA ACGTGGCTGG GCGGAATGCC AGCCATCATC AAACCAGCTA CCGCGACGGC CCAACTGACT CAGGCGATGG TGAAATCAAT TGTCGATAGT GGTCTTGTTC CCGAAGGCGC AATTAGTCTG ATCTGCGGTA GTGCTGGCGA CTTGTTGGAT CATCTGGACA GCCAGGATGT GGTGACTTTC ACGGGGTCAG CGGCGACCGG ACAGATGCTG CGAGTTCAGC CAAATATCGT CGCCAAATCT ATCCCCTTCA CTATGGAAGC TGATTCCCTG AACTGCTGCG TACTGGGCGA AGATGTCACC CCGGATCAAC CGGAGTTTGC GCTGTTTATT CGTGAAGTTG TGCGTGAGAT GACCACAAAA GCCGGGCAAA AATGTACGGC AATCCGGCGG ATTATTGTGC CGCAGGCATT GGTTAATGCT GTCAGTGATG CTCTGGTTGC GCGATTACAG AAAGTCGTGG TCGGTGATCC TGCTCAGGAA GGCGTGAAAA TGGGCGCACT GGTAAATGCT GAGCAGCGTG CCGATGTGCA GGAAAAAGTG AACATATTGC TGGCTGCAGG ATGCGAGATT CGCCTCGGTG GTCAGGCGGA TTTATCTGCT GCGGGTGCCT TCTTCCCGCC AACCTTATTG TACTGTCCGC AGCCGGATGA AACACCGGCG GTACATGCAA CAGAAGCCTT TGGCCCTGTC GCAACGCTGA TGCCAGCACA AAACCAGCGA CATGCTCTGC AACTGGCTTG TGCAGGCGGC GGTAGCCTTG CGGGAACGCT GGTGACGGCT GATCCGCAAA TTGCGCGTCA GTTTATTGCC GACGCGGCAC GTACGCATGG GCGAATTCAG ATCCTCAATG AAGAGTCGGC AAAAGAATCC ACCGGGCATG GCTCCCCACT GCCACAACTG GTACATGGTG GGCCTGGTCG CGCAGGAGGC GGTGAAGAAT TAGGCGGTTT ACGAGCGGTG AAACATTACA TGCAGCGAAC CGCTGTTCAG GGTAGTCCGA CGATGCTTGC CGCTATCAGT AAACAGTGGG TGCGCGGTGC GAAAGTCGAA GAAGATCGTA TTCATCCGTT CCGCAAATAT TTTGAGGAGC TACAACCAGG CGACAGCCTG TTGACTCCCC GCCGCACAAT GACAGAGGCC GATATTGTTA ACTTTGCTTG CCTCAGCGGC GATCATTTCT ATGCACATAT GGATAAGATT GCTGCTGCCG AATCTATTTT CGGTGAGCGG GTGGTGCATG GGTATTTTGT GCTTTCTGCG GCTGCGGGTC TGTTTGTCGA TGCCGGTGTC GGTCCGGTCA TTGCTAACTA CGGGCTGGAA AGCTTGCGTT TTATCGAACC CGTAAAGCCA GGCGATACCA TCCAGGTGCG TCTCACCTGT AAGCGCAAGA CGCTGAAAAA ACAGCGTAGC GCAGAAGAAA AACCAACAGG TGTGGTGGAA TGGGCTGTAG AGGTATTCAA TCAGCATCAA ACCCCGGTGG CGCTGTATTC AATTCTGACG CTGGTGGCCA GGCAGCACGG TGATTTTGTC GATTAA
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Protein sequence | MQQLASFLSG TWQSGRGRSR LIHHAISGEA LWEVTSEGLD MAAARQFAIE KGAPALRAMT FIERAAMLKA VAKHLLSEKE RFYALSAQTG ATRADSWVDI EGGIGTLFTY ASLGSRELPD DTLWPEDELI PLSKEGGFAA RHLLTSKSGV AVHINAFNFP CWGMLEKLAP TWLGGMPAII KPATATAQLT QAMVKSIVDS GLVPEGAISL ICGSAGDLLD HLDSQDVVTF TGSAATGQML RVQPNIVAKS IPFTMEADSL NCCVLGEDVT PDQPEFALFI REVVREMTTK AGQKCTAIRR IIVPQALVNA VSDALVARLQ KVVVGDPAQE GVKMGALVNA EQRADVQEKV NILLAAGCEI RLGGQADLSA AGAFFPPTLL YCPQPDETPA VHATEAFGPV ATLMPAQNQR HALQLACAGG GSLAGTLVTA DPQIARQFIA DAARTHGRIQ ILNEESAKES TGHGSPLPQL VHGGPGRAGG GEELGGLRAV KHYMQRTAVQ GSPTMLAAIS KQWVRGAKVE EDRIHPFRKY FEELQPGDSL LTPRRTMTEA DIVNFACLSG DHFYAHMDKI AAAESIFGER VVHGYFVLSA AAGLFVDAGV GPVIANYGLE SLRFIEPVKP GDTIQVRLTC KRKTLKKQRS AEEKPTGVVE WAVEVFNQHQ TPVALYSILT LVARQHGDFV D
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