Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_2190 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 2348540 |
End bp | 2350588 |
Gene Length | 2049 bp |
Protein Length | 682 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | RHS protein |
Protein accession | ACX39840 |
Protein GI | 260449418 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0179088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGACTC GCTTAACCAC CCTCAGCCAT ACCAGTGAAG GCCACCGCGT GTCGGTCCAC TACGGCTATG ACGATAAAGG CCGCCTGACC GGCGAACGCC AGACGGTGGA GAACCCGGAG ACGGGGGAAC TGCTGTGGCA CCATGAGACC GGACATGCGT ACAACGAACA GGGGCTGGCA AACCGCGTCA CGCCGGACAG TCTGCCGCCG GTGGAGTGGC TGACCTACGG CAGCGGCTAT CTTGCGGGCA TGAAGCTGGG CGGGACGCCG CTGCTGGAGT TCACGCGCGA CCGCCTGCAC CGTGAGACGG TGCGCAGCTT CGGCAGCATG GCAGGCAGTA ATGCCGCATA TAAACTGACC AGCACATACA CCCCCGCAGG CCAGTTACAG AGCCAGCACC TGAACAGCCT GGTGTATGAC CGTGACTACG GGTGGAATGA CAACGGCGAC CTGGTGCGCA TCAGCGGCCC GCGACAGACG CGGGAATACG GCTACAGCGC CACGGGCAGG CTGGAGAGTG TGCGCACCCT CGCACCAGAC CTGGACATCC GCATCCCGTA TGCCACGGAC CCGGCGGGCA ACCGGCTGCC GGACCCGGAG CTGCACCCGG ACAGTACACT CACAGTGTGG CCGGATAACC GCATCGCGGA GGATGCGCAC TATGTCTACC GCCACGATGA ATACGGCAGG CTGACGGAGA AGACGGACCG CATCCCGGCG GGTGTGATAC GGACGGACGA CGAGCGGACC CACCACTACC ACTACGACAG CCAGCACCGC CTGGTGTTCT ACACGCGGAT ACAGCATGGC GAGCCACTGG TCGAGAGCCG CTACCTCTAC GACCCGCTGG GACGGCGAAT GGCAAAACGG GTCTGGCGGC GGGAGCGTGA CCTGACGGGG TGGATGTCGC TGTCGCGTAA ACCGGAGGTG ACGTGGTATG GCTGGGACGG AGACAGGCTG ACGACGGTGC AGACTGACAC CACACGTATC CAGACGGTAT ACGAGCCGGG AAGCTTCACG CCGCTCATCC GGGTCGAGAC AGAGAACGGC GAGCGGGAAA AAGCGCAGCG GCGCAGCCTG GCAGAGACGC TCCAGCAGGA AGGGAGTGAG AACGGCCACG GCGTGGTGTT CCCGGCTGAA CTGGTGCGGC TGCTGGACAG GCTGGAGGAA GAAATCCGGG CAGACCGCGT GAGCAGTGAA AGCCGGGCGT GGCTTGCGCA GTGCGGGCTG ACGGTGGAGC AACTGGCCAG ACAGGTGGAG CCGGAATACA CACCGGCGCG AAAAGTTCAT TTTTACCACT GCGACCACCG GGGCCTGCCG CTGGCGCTCA TCAGCGAAGA CGGCAATACG GCGTGGCGCG GGGAGTATGA TGAATGGGGC AACCAGCTTA ATGAGGAGAA CCCGCATCAC CTGCACCAGC CGTACCGTCT GCCAGGGCAG CAGCATGATG AGGAGTCGGG GCTGTACTAT AACCGTCACC GGCACTACGA TCCGTTGCAG GGGCGGTATA TCACCCCGGA CCCGATTGGG TTGAGAGGTG GATGGAATAT GTATCAGTAT CCGTTGAATC CCATACAAGT GATAGACCCA ATGGGGTTAG ATGCGATTGA GAATATGACA TCAGGTGGAC TAATTTATGC CGTATCTGGT GTACCTGGAT TGATTGCTGC AAACAGCATT ACTAACAGTG CTTACCAGTT CGGTTATGAT ATGGATGCTA TTGTTGGCGG AGCTCATAAT GGGGCCGCCG ATGCAATGAG ACATTGTTAC TTGATGTGTC GAATGACTAA GACATTTGGA TCAACAATAG CTGACGTGAT AGGTAAAAAT CATGAGGCGG CAGGGGATAG ACAAGGTCAG CCAGCTAAAG AAAGAATCAT GGATCTTAAA AATAACACTG TCGGTATTGC TTGTGGCGAT TTTTCTGCCA AATGTAGCGA TGCATGTATT GAAAAATATA ACACTGGGCA ACTCTTCGGG TTAGATGGTA TAAAAGCAGA TAATCCAATA AAAGCAAAGC AAGGGAGTTC AGATGCTTCA AATTATTAG
|
Protein sequence | MSTRLTTLSH TSEGHRVSVH YGYDDKGRLT GERQTVENPE TGELLWHHET GHAYNEQGLA NRVTPDSLPP VEWLTYGSGY LAGMKLGGTP LLEFTRDRLH RETVRSFGSM AGSNAAYKLT STYTPAGQLQ SQHLNSLVYD RDYGWNDNGD LVRISGPRQT REYGYSATGR LESVRTLAPD LDIRIPYATD PAGNRLPDPE LHPDSTLTVW PDNRIAEDAH YVYRHDEYGR LTEKTDRIPA GVIRTDDERT HHYHYDSQHR LVFYTRIQHG EPLVESRYLY DPLGRRMAKR VWRRERDLTG WMSLSRKPEV TWYGWDGDRL TTVQTDTTRI QTVYEPGSFT PLIRVETENG EREKAQRRSL AETLQQEGSE NGHGVVFPAE LVRLLDRLEE EIRADRVSSE SRAWLAQCGL TVEQLARQVE PEYTPARKVH FYHCDHRGLP LALISEDGNT AWRGEYDEWG NQLNEENPHH LHQPYRLPGQ QHDEESGLYY NRHRHYDPLQ GRYITPDPIG LRGGWNMYQY PLNPIQVIDP MGLDAIENMT SGGLIYAVSG VPGLIAANSI TNSAYQFGYD MDAIVGGAHN GAADAMRHCY LMCRMTKTFG STIADVIGKN HEAAGDRQGQ PAKERIMDLK NNTVGIACGD FSAKCSDACI EKYNTGQLFG LDGIKADNPI KAKQGSSDAS NY
|
| |