| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2144 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 2290744 |
|---|
| End bp | 2291658 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | |
|---|
| Product | FimH mannose-binding domain protein |
|---|
| Protein accession | ACX39797 |
|---|
| Protein GI | 260449375 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.075619 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAAAA CAATCAGTAT AAAGGTCCTG TTCGGTATTT ATCTTCTATT AATGGCAGGC
AAAGTTTTTG CCTTCAGTTG TAATGTCGAT GGCGGGTCAA GTATTGGAGC AGGTACAACC
TCTGTTTATG TTAATCTCGA CCCTGTAATA CAGCCGGGCC AGAATCTGGT TGTAGACTTG
TCTCAGCATA TAAGTTGCTG GAATGATTAC GGCGGCTGGT ACGACACTGA TCATATAAAC
CTGGTACAAG GCTCAGCTTT CGCAGGCTCC CTACAGTCAT ATAAAGGATC GCTGTACTGG
AATAATGTGA CCTACCCCTT CCCGTTGACG ACAAATACCA ACGTATTGGA TATTGGTGAT
AAGACACCGA TGCCATTACC GTTAAAACTC TATATTACCC CAGTTGGGGC GGCCGGTGGA
GTTGTCATAA AAGCGGGGGA AGTCATTGCC CGTATTCATA TGTATAAAAT TGCAACATTA
GGAAGCGGAA ATCCGCGTAA TTTTACGTGG AATATTATTT CAAATAACAA TGTTGTTATG
CCAACAGGCG GCTGCACCGT TGATAGTCGA AATGTCACCG TGGATCTCCC GGACTTTCCT
GGAAGCGCAG AAATACCCCT TGGCGTATAT TGCTCAAGCG AACAAAAGCT CTCATTTTAT
CTTTCGGGTG CCACCACTGA CAGTAGCCGA CAAGTGTTTG CTAACACAGC ACCTGATGCA
ACAAAAGCAT CGGGAGTGGG TGTCACTCTA ATGCGTAATG GAAAAATACT GGCTACGGGA
GAAAATGTCT CCCTGGGGAC AGTAAATAAA AGCAAAGTAC CTCTGGGTTT AAGCGCAACC
TATGGACAAA CAGGAAACAA GGTTTCAGCC GGAACCGTCC AGTCAGTCAT TGGTGTCACT
TTTATCTATG AATAA
|
|---|
| Protein sequence | MGKTISIKVL FGIYLLLMAG KVFAFSCNVD GGSSIGAGTT SVYVNLDPVI QPGQNLVVDL
SQHISCWNDY GGWYDTDHIN LVQGSAFAGS LQSYKGSLYW NNVTYPFPLT TNTNVLDIGD
KTPMPLPLKL YITPVGAAGG VVIKAGEVIA RIHMYKIATL GSGNPRNFTW NIISNNNVVM
PTGGCTVDSR NVTVDLPDFP GSAEIPLGVY CSSEQKLSFY LSGATTDSSR QVFANTAPDA
TKASGVGVTL MRNGKILATG ENVSLGTVNK SKVPLGLSAT YGQTGNKVSA GTVQSVIGVT
FIYE
|
|---|
| |