Gene EcDH1_2112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2112 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2255959 
End bp2257146 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content50% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionACX39767 
Protein GI260449345 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000539855 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTAT CCCTACGACG CTCTACCAGC GCCCTTCTTG CCTCGTCGTT GTTATTAACC 
ATCGGACGCG GCGCTACGCT GCCATTTATG ACCATTTACT TGAGTCGCCA GTACAGCCTG
AGTGTCGATC TAATCGGTTA TGCGATGACA ATTGCGCTCA CTATTGGCGT CGTTTTTAGC
CTCGGTTTTG GTATCCTGGC GGATAAGTTC GACAAGAAAC GCTATATGTT ACTGGCAATT
ACCGCCTTCG CCAGCGGTTT TATTGCCATT ACTTTAGTGA ATAACGTGAC GCTGGTTGTG
CTCTTTTTTG CCCTCATTAA CTGCGCCTAT TCTGTTTTTG CTACCGTGCT GAAAGCCTGG
TTTGCCGACA ATCTTTCGTC CACCAGCAAA ACGAAAATCT TCTCAATCAA CTACACCATG
CTAAACATTG GCTGGACCAT CGGTCCGCCG CTCGGCACGC TGTTGGTAAT GCAGAGCATC
AATCTGCCCT TCTGGCTGGC AGCTATCTGT TCCGCGTTTC CCATGCTTTT CATTCAAATT
TGGGTAAAGC GCAGCGAGAA AATCATCGCC ACGGAAACAG GCAGTGTCTG GTCGCCGAAA
GTTTTATTAC AAGATAAAGC ACTGTTGTGG TTTACCTGCT CTGGTTTTCT GGCTTCTTTT
GTAAGCGGCG CATTTGCTTC ATGCATTTCA CAATATGTGA TGGTGATTGC TGATGGGGAT
TTTGCCGAAA AGGTGGTCGC GGTTGTTCTT CCGGTGAATG CTGCCATGGT GGTTACGTTG
CAATATTCCG TGGGCCGCCG ACTTAACCCG GCTAACATCC GCGCGCTGAT GACAGCAGGC
ACCCTCTGTT TCGTCATCGG TCTGGTCGGT TTTATTTTTT CCGGCAACAG CCTGCTATTG
TGGGGTATGT CAGCTGCGGT ATTTACTGTC GGTGAAATCA TTTATGCGCC GGGCGAGTAT
ATGTTGATTG ACCATATTGC GCCGCCAGAA ATGAAAGCCA GCTATTTTTC CGCCCAGTCT
TTAGGCTGGC TTGGTGCCGC GATTAACCCA TTAGTGAGTG GCGTAGTGCT AACCAGCCTG
CCGCCTTCCT CGCTGTTTGT CATCTTAGCG TTGGTGATCA TTGCTGCGTG GGTGCTGATG
TTAAAAGGGA TTCGAGCAAG ACCGTGGGGG CAGCCCGCGC TTTGTTGA
 
Protein sequence
MNLSLRRSTS ALLASSLLLT IGRGATLPFM TIYLSRQYSL SVDLIGYAMT IALTIGVVFS 
LGFGILADKF DKKRYMLLAI TAFASGFIAI TLVNNVTLVV LFFALINCAY SVFATVLKAW
FADNLSSTSK TKIFSINYTM LNIGWTIGPP LGTLLVMQSI NLPFWLAAIC SAFPMLFIQI
WVKRSEKIIA TETGSVWSPK VLLQDKALLW FTCSGFLASF VSGAFASCIS QYVMVIADGD
FAEKVVAVVL PVNAAMVVTL QYSVGRRLNP ANIRALMTAG TLCFVIGLVG FIFSGNSLLL
WGMSAAVFTV GEIIYAPGEY MLIDHIAPPE MKASYFSAQS LGWLGAAINP LVSGVVLTSL
PPSSLFVILA LVIIAAWVLM LKGIRARPWG QPALC