Gene EcDH1_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1901 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2054076 
End bp2054963 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content52% 
IMG OID 
ProductExcinuclease ABC C subunit domain protein 
Protein accessionACX39559 
Protein GI260449137 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.195835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTACGGC GTTTAACTTC TCCGCGGCTC GAATTTGAAG CTGCGGCAAT TTATGAATAT 
CCCGAACATT TACGTTCATT CCTTAATGAC TTACCCACCC GACCAGGGGT GTATCTGTTT
CATGGTGAAA GTGACACCAT GCCGCTCTAT ATCGGCAAAA GCGTTAACAT CCGCAGCCGC
GTCCTTTCTC ATTTACGTAC CCCGGATGAA GCCGCCATGC TACGGCAATC CCGACGGATC
AGCTGGATAT GTACCGCCGG TGAAATCGGC GCTCTGCTCC TTGAAGCGCG ATTAATCAAA
GAACAACAGC CGCTGTTTAA TAAACGGTTG CGCCGCAATC GCCAGCTCTG TGCCCTGCAA
TTAAATGAAA AGCGCGTCGA TGTGGTGTAT GCCAAAGAGG TGGATTTTTC ACGAGCCCCC
AACCTGTTTG GCCTGTTTGC CAATAGGCGC GCAGCTTTGC AAGCATTGCA GACCATCGCT
GATGAACAAA AACTTTGTTA TGGCCTGCTG GGACTGGAAC CGTTAAGTCG CGGTCGTGCA
TGTTTTCGTT CAGCGCTAAA ACGTTGCGCC GGAGCATGCT GCGGTAAAGA GAGCCATGAG
GAACATGCGC TACGCTTGCG CCAGTCTCTG GAGCGTTTGC GGGTGGTGTG TTGGCCTTGG
CAAGGGGCGG TGGCGCTGAA AGAACAGCAC CCGGAAATGA CTCAATATCA TATTATTCAA
AACTGGCTGT GGCTGGGGGC GGTTAATTCG CTGGAAGAAG CGACAACGTT AATTCGGACA
CCCGCCGGGT TTGATCACGA CGGTTATAAA ATTCTTTGTA AGCCGCTGCT TTCCGGTAAC
TATGAAATTA CTGAACTTGA TCCGGCGAAT GACCAGCGAG CCAGTTGA
 
Protein sequence
MVRRLTSPRL EFEAAAIYEY PEHLRSFLND LPTRPGVYLF HGESDTMPLY IGKSVNIRSR 
VLSHLRTPDE AAMLRQSRRI SWICTAGEIG ALLLEARLIK EQQPLFNKRL RRNRQLCALQ
LNEKRVDVVY AKEVDFSRAP NLFGLFANRR AALQALQTIA DEQKLCYGLL GLEPLSRGRA
CFRSALKRCA GACCGKESHE EHALRLRQSL ERLRVVCWPW QGAVALKEQH PEMTQYHIIQ
NWLWLGAVNS LEEATTLIRT PAGFDHDGYK ILCKPLLSGN YEITELDPAN DQRAS