Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_1548 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 1685949 |
End bp | 1688429 |
Gene Length | 2481 bp |
Protein Length | 826 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | fimbrial biogenesis outer membrane usher protein |
Protein accession | ACX39216 |
Protein GI | 260448794 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.2778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGAGAA TGACCCCACT TGCATCAGCA ATCGTAGCGT TATTGCTCGG CATTGAAGCT TATGCAGCTG AAGAAACCTT TGATACCCAT TTTATGATAG GTGGAATGAA AGACCAGCAG GTTGCAAATA TTCGTCTTGA TGATAATCAA CCCTTACCGG GGCAGTATGA CATCGATATT TATGTCAATA AGCAATGGCG CGGGAAATAT GAGATTATTG TTAAAGACAA CCCGCAAGAA ACATGTTTAT CAAGAGAAGT TATCAAGCGG TTAGGCATTA ATAGCGATAA CTTCGCCAGC GGTAAGCAAT GTTTAACATT TGAGCAACTT GTTCAGGGTG GGAGCTATAC CTGGGATATC GGGGTTTTTC GTCTCGATTT CAGTGTCCCG CAGGCCTGGG TGGAAGAACT GGAAAGTGGC TATGTTCCAC CGGAAAACTG GGAGCGGGGT ATTAATGCGT TTTATACCTC TTATTATCTG AGTCAGTATT ACAGCGACTA TAAAGCGTCG GGTAATAACA AGAGTACATA TGTACGTTTT AACAGCGGGT TAAATTTACT GGGGTGGCAA CTGCATTCTG ATGCCAGTTT CAGTAAAACA AATAACAATC CAGGGGTGTG GAAAAGCAAT ACCCTGTATC TGGAACGTGG ATTTGCCCAA CTTCTCGGCA CGCTTCGCGT GGGTGATATG TACACATCAA GCGATATTTT TGATTCTGTT CGCTTCAGAG GTGTGCGGTT GTTTCGTGAT ATGCAGATGT TGCCTAACTC GAAACAAAAT TTTACGCCAC GGGTGCAGGG GATTGCTCAG AGTAACGCGC TGGTAACTAT TGAACAGAAT GGTTTTGTGG TTTATCAGAA AGAGGTTCCT CCTGGCCCGT TCGCGATTAC AGATTTGCAG TTGGCCGGTG GTGGAGCAGA TCTTGATGTC AGCGTGAAAG AGGCGGACGG CTCGGTAACC ACCTATCTGG TGCCTTATGC AGCGGTGCCA AATATGCTGC AACCCGGCGT GTCGAAATAT GATTTAGCGG CGGGTCGTAG CCATATTGAA GGGGCGAGCA AACAAAGTGA TTTTGTCCAG GCGGGTTATC AGTATGGTTT TAATAATTTA TTGACGCTGT ATGGTGGCTC GATGGTCGCG AATAATTATT ACGCGTTTAC TTTGGGGGCT GGCTGGAATA CACGCATTGG TGCCATTTCC GTCGATGCCA CTAAGTCGCA TAGTAAACAA GACAACGGCG ATGTGTTTGA CGGGCAAAGT TATCAAATTG CCTACAACAA ATTTGTGAGC CAAACGTCGA CGCGTTTTGG TCTGGCGGCC TGGCGTTATT CGTCGCGTGA TTACCGGACA TTTAACGATC ACGTTTGGGC AAACAATAAA GATAATTATC GCCGTGATGA AAACGATGTC TATGACATTG CCGATTATTA CCAGAACGAT TTTGGCCGCA AAAATAGCTT TTCCGCCAAT ATGAGCCAGT CATTGCCAGA AGGTTGGGGG TCTGTGTCAT TAAGTACGTT ATGGCGAGAT TACTGGGGGC GTAGCGGCAG TAGTAAGGAT TATCAGTTGA GTTATTCCAA CAACCTGCGA CGGATAAGCT ATACCCTCGC GGCAAGCCAG GCTTATGACG AGAATCATCA TGAAGAGAAA CGTTTTAATA TTTTTATATC GATTCCCTTT GATTGGGGTG ATGACGTTTC GACGCCTCGT CGGCAAATAT ATATGTCTAA CTCAACGACG TTTGATGATC AGGGGTTTGC CTCAAATAAT ACGGGATTAT CAGGAACAGT AGGGAGTCGG GATCAGTTCA ATTATGGTGT CAACCTGAGT CATCAACATC AGGGAAATGA AACGACAGCT GGGGCGAATT TGACCTGGAA CGCGCCGGTT GCGACAGTGA ATGGCAGTTA TAGTCAGTCG AGTACTTATC GACAGGCTGG AGCCAGTGTT TCAGGGGGCA TTGTCGCCTG GTCGGGTGGC GTTAATCTGG CGAACCGTCT TTCCGAAACG TTTGCTGTGA TGAATGCGCC AGGAATTAAA GATGCTTATG TCAATGGGCA AAAATATCGC ACAACAAACC GTAATGGAGT GGTGATATAC GACGGAATGA CACCTTATCG GGAAAATCAC CTGATGCTGG ATGTGTCGCA AAGCGATAGC GAAGCAGAAT TACGTGGCAA CCGGAAAATT GCCGCCCCTT ATCGCGGCGC GGTTGTACTG GTTAATTTTG ATACCGATCA GCGCAAGCCA TGGTTTATAA AAGCGTTAAG AGCAGATGGG CAATCATTAA CGTTTGGTTA TGAAGTCAAT GATATCCATG GTCATAATAT TGGCGTTGTC GGCCAGGGAA GTCAGTTATT TATTCGCACC AATGAAGTAC CGCCATCGGT TAATGTGGCA ATTGATAAGC AACAAGGACT TTCATGCACA ATCACCTTCG GTAAAGAGAT TGATGAAAGT AGAAATTATA TTTGCCAGTA A
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Protein sequence | MLRMTPLASA IVALLLGIEA YAAEETFDTH FMIGGMKDQQ VANIRLDDNQ PLPGQYDIDI YVNKQWRGKY EIIVKDNPQE TCLSREVIKR LGINSDNFAS GKQCLTFEQL VQGGSYTWDI GVFRLDFSVP QAWVEELESG YVPPENWERG INAFYTSYYL SQYYSDYKAS GNNKSTYVRF NSGLNLLGWQ LHSDASFSKT NNNPGVWKSN TLYLERGFAQ LLGTLRVGDM YTSSDIFDSV RFRGVRLFRD MQMLPNSKQN FTPRVQGIAQ SNALVTIEQN GFVVYQKEVP PGPFAITDLQ LAGGGADLDV SVKEADGSVT TYLVPYAAVP NMLQPGVSKY DLAAGRSHIE GASKQSDFVQ AGYQYGFNNL LTLYGGSMVA NNYYAFTLGA GWNTRIGAIS VDATKSHSKQ DNGDVFDGQS YQIAYNKFVS QTSTRFGLAA WRYSSRDYRT FNDHVWANNK DNYRRDENDV YDIADYYQND FGRKNSFSAN MSQSLPEGWG SVSLSTLWRD YWGRSGSSKD YQLSYSNNLR RISYTLAASQ AYDENHHEEK RFNIFISIPF DWGDDVSTPR RQIYMSNSTT FDDQGFASNN TGLSGTVGSR DQFNYGVNLS HQHQGNETTA GANLTWNAPV ATVNGSYSQS STYRQAGASV SGGIVAWSGG VNLANRLSET FAVMNAPGIK DAYVNGQKYR TTNRNGVVIY DGMTPYRENH LMLDVSQSDS EAELRGNRKI AAPYRGAVVL VNFDTDQRKP WFIKALRADG QSLTFGYEVN DIHGHNIGVV GQGSQLFIRT NEVPPSVNVA IDKQQGLSCT ITFGKEIDES RNYICQ
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