| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1097 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 1175008 |
|---|
| End bp | 1175964 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | sigma E regulatory protein, MucB/RseB |
|---|
| Protein accession | ACX38771 |
|---|
| Protein GI | 260448349 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0259627 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAC TTTGGTTTGC CATGTCATTA GTGACAGGTA GCCTGTTATT CTCTGCTAAC
GCCTCGGCCA CTCCCGCGTC CGGGGCGTTA TTACAGCAGA TGAACCTGGC CAGTCAGTCA
CTGAATTACG AGCTGTCATT CATCAGCATC AATAAACAGG GTGTTGAGTC TCTGCGTTAT
CGACATGCAC GCCTCGATAA CCGTCCTCTT GCACAATTGT TGCAAATGGA TGGCCCGCGC
CGGGAAGTGG TACAGCGCGG CAATGAAATC AGCTATTTTG AACCGGGACT TGAACCGTTC
ACGCTTAATG GCGATTACAT TGTTGATTCT CTGCCATCGC TTATCTATAC CGATTTCAAA
CGCCTTTCTC CTTACTACGA CTTTATCTCC GTCGGGCGCA CGCGTATTGC TGATCGTCTT
TGCGAAGTCA TTCGCGTGGT TGCCCGAGAT GGTACACGCT ACAGCTACAT CGTGTGGATG
GACACCGAAT CGAAATTACC GATGCGGGTT GATCTCCTTG ATCGCGATGG TGAAACGCTG
GAACAATTTC GCGTGATTGC TTTTAACGTC AATCAGGATA TCAGCAGCAG TATGCAGACG
CTGGCGAAGG CAAATTTGCC GCCGTTGCTT TCTGTTCCTG TAGGTGAAAA AGCTAAATTC
AGCTGGACGC CAACCTGGTT GCCACAGGGT TTTAGCGAAG TTTCCAGTAG TCGACGTCCG
CTACCGACGA TGGACAACAT GCCTATCGAA TCACGTCTCT ATTCCGACGG ATTATTCAGC
TTCTCGGTAA ACGTTAACCG CGCTACGCCA TCGAGCACCG ATCAGATGTT GCGCACCGGA
CGCAGAACCG TCAGTACAAG CGTACGTGAT AACGCCGAAA TCACCATTGT CGGTGAACTG
CCGCCGCAAA CGGCGAAACG CATTGCCGAG AATATTAAGT TCGGGGCAGC GCAATGA
|
|---|
| Protein sequence | MKQLWFAMSL VTGSLLFSAN ASATPASGAL LQQMNLASQS LNYELSFISI NKQGVESLRY
RHARLDNRPL AQLLQMDGPR REVVQRGNEI SYFEPGLEPF TLNGDYIVDS LPSLIYTDFK
RLSPYYDFIS VGRTRIADRL CEVIRVVARD GTRYSYIVWM DTESKLPMRV DLLDRDGETL
EQFRVIAFNV NQDISSSMQT LAKANLPPLL SVPVGEKAKF SWTPTWLPQG FSEVSSSRRP
LPTMDNMPIE SRLYSDGLFS FSVNVNRATP SSTDQMLRTG RRTVSTSVRD NAEITIVGEL
PPQTAKRIAE NIKFGAAQ
|
|---|
| |