Gene EcDH1_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0929 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1001126 
End bp1001608 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content46% 
IMG OID 
ProductCRISPR-associated protein, Cse2 family 
Protein accessionACX38612 
Protein GI260448190 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATG AAATTGATGC AATGGCTTTA TATCGAGCCT GGCAACAACT GGATAATGGA 
TCATGTGCGC AAATTAGACG TGTTTCAGAA CCTGATGAAT TACGCGATAT CCCTGCGTTT
TATAGGCTGG TGCAACCTTT TGGTTGGGAA AACCCACGTC ACCAGCAGGC TCTTTTGCGC
ATGGTGTTTT GCCTGAGCGC AGGAAAGAAT GTCATCCGAC ATCAGGACAA AAAATCGGAG
CAAACAACAG GTATCTCGTT GGGAAGAGCT TTAGCCAATA GTGGAAGAAT TAACGAGCGC
CGTATCTTTC AATTAATTCG GGCTGACAGA ACAGCCGATA TGGTCCAGTT ACGTCGATTA
CTTACTCACG CCGAACCCGT ACTTGACTGG CCATTAATGG CCAGGATGTT GACCTGGTGG
GGAAAGCGCG AACGCCAGCA ACTTCTGGAA GATTTTGTAT TGACCACAAA CAAAAATGCG
TAA
 
Protein sequence
MADEIDAMAL YRAWQQLDNG SCAQIRRVSE PDELRDIPAF YRLVQPFGWE NPRHQQALLR 
MVFCLSAGKN VIRHQDKKSE QTTGISLGRA LANSGRINER RIFQLIRADR TADMVQLRRL
LTHAEPVLDW PLMARMLTWW GKRERQQLLE DFVLTTNKNA