| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_0670 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 708367 |
|---|
| End bp | 710259 |
|---|
| Gene Length | 1893 bp |
|---|
| Protein Length | 630 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | DNA topoisomerase IV, B subunit |
|---|
| Protein accession | ACX38356 |
|---|
| Protein GI | 260447934 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAA CTTATAACGC TGATGCCATT GAGGTACTCA CCGGGCTTGA GCCGGTTCGC
CGCCGTCCGG GGATGTATAC CGATACCACT CGCCCTAACC ATTTGGGGCA AGAAGTCATT
GATAACAGTG TGGATGAAGC ACTGGCGGGT CACGCAAAAC GCGTGGACGT TATTTTACAT
GCTGACCAGT CGTTAGAAGT TATTGACGAT GGGCGCGGGA TGCCGGTGGA TATTCACCCG
GAAGAGGGTG TACCGGCGGT TGAACTGATT CTTTGCCGTC TGCATGCAGG CGGTAAATTC
TCTAACAAAA ATTACCAGTT CTCTGGCGGC CTGCATGGCG TGGGGATTTC GGTGGTTAAC
GCCCTGTCGA AGCGCGTAGA AGTTAACGTG CGCCGCGATG GTCAGGTTTA TAACATCGCC
TTTGAAAATG GCGAAAAGGT GCAGGATTTA CAGGTTGTCG GCACTTGCGG TAAACGCAAT
ACTGGTACCA GTGTGCACTT CTGGCCGGAT GAAACCTTCT TTGACAGCCC GCGATTTTCT
GTTTCACGCC TGACGCATGT GCTGAAAGCC AAAGCGGTAT TGTGCCCTGG CGTTGAGATC
ACTTTTAAAG ATGAGATCAA CAATACCGAA CAACGCTGGT GCTATCAGGA CGGTCTGAAT
GATTACCTGG CGGAAGCGGT AAATGGTCTG CCGACGCTGC CGGAAAAACC GTTTATCGGT
AATTTCGCTG GTGATACTGA AGCTGTGGAC TGGGCGCTAC TGTGGCTGCC GGAAGGCGGT
GAACTGCTGA CCGAAAGCTA CGTCAACCTT ATCCCAACGA TGCAGGGCGG TACCCATGTT
AATGGTCTGC GTCAGGGCCT GTTGGACGCG ATGCGTGAGT TCTGTGAATA CCGCAATATT
CTGCCGCGCG GTGTAAAGCT GTCGGCGGAA GATATCTGGG ATCGCTGCGC CTATGTGCTG
TCAGTAAAAA TGCAGGATCC GCAGTTTGCC GGGCAGACGA AAGAGCGTCT CTCTTCGCGT
CAATGCGCGG CATTCGTTTC TGGCGTGGTG AAAGATGCCT TTATCCTGTG GCTGAACCAG
AACGTTCAGG CGGCTGAACT GCTGGCGGAG ATGGCGATTT CCAGCGCCCA GCGCCGTATG
CGTGCGGCCA AAAAAGTGGT GCGTAAAAAG CTGACCAGCG GCCCGGCGTT GCCTGGCAAA
CTGGCTGATT GTACCGCGCA GGACCTTAAC CGTACCGAGC TGTTCCTTGT GGAAGGTGAC
TCCGCAGGCG GATCTGCCAA GCAGGCGCGC GATCGCGAAT ATCAGGCGAT CATGCCACTG
AAAGGTAAGA TCCTTAACAC CTGGGAAGTC TCTTCCGACG AAGTGCTGGC TTCGCAGGAA
GTGCACGATA TTTCGGTAGC GATCGGTATC GATCCTGACA GCGACGATCT GAGCCAGCTT
CGTTATGGCA AAATCTGTAT CCTCGCGGAT GCGGACTCTG ATGGTCTGCA CATTGCCACG
CTGCTCTGCG CTTTGTTCGT AAAACATTTC CGCGCGTTGG TGAAACACGG TCACGTTTAC
GTCGCACTGC CACCGCTCTA CCGTATTGAT CTCGGGAAAG AGGTTTATTA CGCGCTGACG
GAAGAAGAGA AAGAGGGCGT ACTTGAGCAA TTAAAACGCA AGAAAGGCAA GCCGAACGTC
CAGCGTTTTA AAGGTCTGGG GGAAATGAAC CCGATGCAAT TGCGCGAAAC CACGCTTGAT
CCGAACACTC GCCGTCTGGT GCAGTTGACT ATCGATGATG AAGACGATCA GCGTACTGAC
GCGATGATGG ATATGCTGCT GGCGAAGAAA CGCTCGGAAG ATCGCCGCAA CTGGTTGCAA
GAGAAAGGCG ACATGGCGGA GATTGAGGTT TAA
|
|---|
| Protein sequence | MTQTYNADAI EVLTGLEPVR RRPGMYTDTT RPNHLGQEVI DNSVDEALAG HAKRVDVILH
ADQSLEVIDD GRGMPVDIHP EEGVPAVELI LCRLHAGGKF SNKNYQFSGG LHGVGISVVN
ALSKRVEVNV RRDGQVYNIA FENGEKVQDL QVVGTCGKRN TGTSVHFWPD ETFFDSPRFS
VSRLTHVLKA KAVLCPGVEI TFKDEINNTE QRWCYQDGLN DYLAEAVNGL PTLPEKPFIG
NFAGDTEAVD WALLWLPEGG ELLTESYVNL IPTMQGGTHV NGLRQGLLDA MREFCEYRNI
LPRGVKLSAE DIWDRCAYVL SVKMQDPQFA GQTKERLSSR QCAAFVSGVV KDAFILWLNQ
NVQAAELLAE MAISSAQRRM RAAKKVVRKK LTSGPALPGK LADCTAQDLN RTELFLVEGD
SAGGSAKQAR DREYQAIMPL KGKILNTWEV SSDEVLASQE VHDISVAIGI DPDSDDLSQL
RYGKICILAD ADSDGLHIAT LLCALFVKHF RALVKHGHVY VALPPLYRID LGKEVYYALT
EEEKEGVLEQ LKRKKGKPNV QRFKGLGEMN PMQLRETTLD PNTRRLVQLT IDDEDDQRTD
AMMDMLLAKK RSEDRRNWLQ EKGDMAEIEV
|
|---|
| |