Gene EcDH1_0640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0640 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp677507 
End bp678439 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content50% 
IMG OID 
Producttranscriptional regulator, LysR family 
Protein accessionACX38326 
Protein GI260447904 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0380371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAATA GCTGGCCTTT AGCCAAAGAC TTGCAGGTAC TGGTAGAAAT CGTTCACAGC 
GGGAGTTTTA GCGCCGCAGC GGCGACGCTT GGGCAGACGC CTGCATTTGT CACCAAGCGG
ATCCAAATCC TTGAAAATAC GCTGGCAACA ACGCTGCTGA ACCGCTCCGC TCGCGGCGTG
GCGCTGACTG AAAGTGGCCA ACGTTGTTAC GAACATGCGT TGGAAATCCT CACCCAATAT
CAGCGACTGG TCGATGACGT CACGCAAATC AAAACGCGCC CGGAGGGGAT GATTCGTATT
GGTTGCAGTT TTGGTTTTGG GCGCAGCCAT ATTGCGCCAG CTATTACCGA ACTGATGCGC
AATTATCCTG AGTTACAGGT GCATTTTGAA TTGTTCGATC GGCAAATTGA TTTAGTGCAG
GATAATATTG ATCTGGATAT TCGTATTAAT GACGAAATTC CTGATTATTA TATTGCGCAT
CTTTTGACAA AAAATAAAAG AATATTATGC GCAGCACCTG AGTATCTGCA AAAATATCCG
CAGCCACAAT CCCTACAGGA ATTAAGTCGT CATGACTGTC TGGTGACCAA AGAGCGCGAT
ATGACCCATG GAATATGGGA GTTGGGGAAC GGTCAGGAGA AAAAATCGGT GAAGGTAAGC
GGGCATCTTT CCTCCAATAG CGGCGAGATT GTGCTGCAAT GGGCGCTGGA GGGCAAAGGG
ATTATGCTGC GTTCCGAGTG GGATGTGTTG CCGTTTCTGG AGAGTGGCAA ACTGGTGCAA
GTATTGCCAG AGTATGCACA AAGCGCCAAT ATCTGGGCTG TTTACCGGGA GCCGCTCTAT
CGCAGCATGA AATTACGTGT CTGCGTGGAA TTTCTGGCGG CATGGTGCCA GCAACGGCTG
GGCAAGCCCG ATGAAGGCTA TCAGGTCATG TAG
 
Protein sequence
MLNSWPLAKD LQVLVEIVHS GSFSAAAATL GQTPAFVTKR IQILENTLAT TLLNRSARGV 
ALTESGQRCY EHALEILTQY QRLVDDVTQI KTRPEGMIRI GCSFGFGRSH IAPAITELMR
NYPELQVHFE LFDRQIDLVQ DNIDLDIRIN DEIPDYYIAH LLTKNKRILC AAPEYLQKYP
QPQSLQELSR HDCLVTKERD MTHGIWELGN GQEKKSVKVS GHLSSNSGEI VLQWALEGKG
IMLRSEWDVL PFLESGKLVQ VLPEYAQSAN IWAVYREPLY RSMKLRVCVE FLAAWCQQRL
GKPDEGYQVM