Gene EcDH1_0558 details

Gene Information

• Locus tag: EcDH1_0558
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: -
• Start bp: 588328
• End bp: 590364
• Gene Length: 2037 bp
• Protein Length: 678 aa
• Translation table: 11
• GC content: 54%
• Product: LppC family lipoprotein
• Protein accession: ACX38246
• Protein GI: 260447824

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTACCCT CAACATTTTC TCGTTTGAAA GCCGCGCGTT GTCTGCCTGT TGTTCTGGCA 
GCCCTGATTT TCGCCGGTTG TGGCACCCAT ACTCCCGATC AGTCCACTGC TTATATGCAG 
GGCACGGCGC AGGCTGATTC TGCCTTTTAT CTTCAGCAGA TGCAGCAAAG CTCTGATGAT 
ACCAGGATCA ACTGGCAATT ACTCGCCATT CGTGCACTGG TGAAAGAAGG TAAAACCGGG 
CAGGCGGTTG AGTTGTTTAA CCAACTACCG CAAGAACTGA ACGATGCTCA GCGTCGCGAG 
AAAACACTGC TGGCGGTAGA GATTAAACTG GCGCAGAAAG ATTTTGCTGG CGCGCAAAAC 
TTGCTGGCGA AAATCACACC TGCCGATTTA GAACAAAACC AGCAAGCGCG TTACTGGCAG 
GCAAAAATCG ATGCCAGCCA GGGGCGTCCT TCCATTGATT TACTGCGCGC GTTAATTGCT 
CAGGAACCGC TGCTTGGCGC GAAAGAAAAA CAGCAGAATA TTGATGCCAC CTGGCAGGCG 
CTCTCCTCCA TGACTCAGGA ACAGGCGAAT ACGCTGGTGA TCAACGCCGA CGAAAATATT 
CTGCAAGGCT GGCTGGATCT GCAGCGCGTC TGGTTTGATA ACCGTAACGA TCCCGACATG 
ATGAAAGCCG GGATCGCCGA CTGGCAGAAA CGTTATCCGA ACAATCCGGG CGCGAAAATG 
CTGCCAACGC AGTTGGTTAA CGTAAAAGCG TTTAAACCAG CCTCGACCAA CAAAATCGCC 
CTGCTGTTGC CACTGAATGG CCAGGCAGCG GTATTTGGTC GCACTATTCA GCAAGGCTTT 
GAAGCGGCGA AAAATATCGG CACTCAGCCA GTGGCAGCTC AGGTAGCTGC CGCACCTGCC 
GCAGACGTAG CTGAACAACC TCAGCCGCAA ACCGTGGATG GCGTTGCCAG CCCGGCACAA 
GCCTCGGTTA GCGATCTGAC CGGTGAACAG CCTGCAGCCC AGCCGGTGCC TGTAAGCGCC 
CCGGCGACAA GCACCGCAGC GGTAAGCGCA CCCGCAAATC CATCCGCAGA GCTGAAAATC 
TACGATACCT CATCACAACC ACTTAGCCAG ATCTTAAGCC AGGTTCAGCA GGATGGCGCG 
AGTATTGTGG TCGGTCCGTT GCTGAAAAAT AACGTTGAAG AGTTGCTGAA GAGCAACACT 
CCGCTGAACG TACTGGCACT GAACCAGCCG GAGAATATCG AAAATCGCGT CAATATTTGT 
TACTTCGCGC TTTCACCGGA AGACGAAGCG CGCGATGCAG CGCGTCATAT TCGTGACCAG 
GGTAAACAAG CGCCGCTGGT GCTGATCCCA CGCAGTTCAT TGGGCGATCG CGTAGCCAAT 
GCGTTTGCGC AAGAGTGGCA GAAACTGGGC GGCGGCACCG TTCTGCAACA AAAATTTGGT 
TCCACCAGCG AATTACGCGC GGGTGTTAAC GGCGGTTCTG GTATTGCTTT AACGGGTAGC 
CCGATTACTC TCAGAGCGAC AACCGACTCC GGCATGACGA CCAACAATCC AACGCTGCAA 
ACCACGCCAA CCGATGACCA GTTCACCAAT AATGGCGGTC GTGTCGATGC GGTGTACATT 
GTGGCAACGC CGGGTGAAAT CGCTTTTATC AAACCGATGA TCGCCATGCG TAACGGTAGC 
CAGAGCGGTG CAACGCTGTA CGCCAGCTCC CGCAGTGCGC AAGGGACCGC TGGCCCGGAT 
TTCCGACTGG AGATGGAAGG CTTGCAGTAC AGCGAAATCC CGATGCTGGC AGGCGGTAAT 
CTACCGTTAA TGCAGCAGGC ACTCAGCGCG GTGAATAACG ATTATTCACT GGCTCGCATG 
TATGCGATGG GCGTCGATGC CTGGTCGCTG GCAAATCATT TCTCACAAAT GCGCCAGGTT 
CAGGGTTTTG AAATCAACGG TAATACCGGA AGCCTGACGG CTAACCCGGA TTGCGTGATT 
AACAGGAACT TATCATGGCT ACAGTACCAA CAAGGTCAGG TAGTCCCCGT CAGTTAA 

 

Protein sequence

MVPSTFSRLK AARCLPVVLA ALIFAGCGTH TPDQSTAYMQ GTAQADSAFY LQQMQQSSDD 
TRINWQLLAI RALVKEGKTG QAVELFNQLP QELNDAQRRE KTLLAVEIKL AQKDFAGAQN 
LLAKITPADL EQNQQARYWQ AKIDASQGRP SIDLLRALIA QEPLLGAKEK QQNIDATWQA 
LSSMTQEQAN TLVINADENI LQGWLDLQRV WFDNRNDPDM MKAGIADWQK RYPNNPGAKM 
LPTQLVNVKA FKPASTNKIA LLLPLNGQAA VFGRTIQQGF EAAKNIGTQP VAAQVAAAPA 
ADVAEQPQPQ TVDGVASPAQ ASVSDLTGEQ PAAQPVPVSA PATSTAAVSA PANPSAELKI 
YDTSSQPLSQ ILSQVQQDGA SIVVGPLLKN NVEELLKSNT PLNVLALNQP ENIENRVNIC 
YFALSPEDEA RDAARHIRDQ GKQAPLVLIP RSSLGDRVAN AFAQEWQKLG GGTVLQQKFG 
STSELRAGVN GGSGIALTGS PITLRATTDS GMTTNNPTLQ TTPTDDQFTN NGGRVDAVYI 
VATPGEIAFI KPMIAMRNGS QSGATLYASS RSAQGTAGPD FRLEMEGLQY SEIPMLAGGN 
LPLMQQALSA VNNDYSLARM YAMGVDAWSL ANHFSQMRQV QGFEINGNTG SLTANPDCVI 
NRNLSWLQYQ QGQVVPVS