Gene EcDH1_0254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0254 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp282980 
End bp283834 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content54% 
IMG OID 
ProductRNA polymerase, sigma 32 subunit, RpoH 
Protein accessionACX37945 
Protein GI260447523 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACA AAATGCAAAG TTTAGCTTTA GCCCCAGTTG GCAACCTGGA TTCCTACATC 
CGGGCAGCTA ACGCGTGGCC GATGTTGTCG GCTGACGAGG AGCGGGCGCT GGCTGAAAAG
CTGCATTACC ATGGCGATCT GGAAGCAGCT AAAACGCTGA TCCTGTCTCA CCTGCGGTTT
GTTGTTCATA TTGCTCGTAA TTATGCGGGC TATGGCCTGC CACAGGCGGA TTTGATTCAG
GAAGGTAACA TCGGCCTGAT GAAAGCAGTG CGCCGTTTCA ACCCGGAAGT GGGTGTGCGC
CTGGTCTCCT TCGCCGTTCA CTGGATCAAA GCAGAGATCC ACGAATACGT TCTGCGTAAC
TGGCGTATCG TCAAAGTTGC GACCACCAAA GCGCAGCGCA AACTGTTCTT CAACCTGCGT
AAAACCAAGC AGCGTCTGGG CTGGTTTAAC CAGGATGAAG TCGAAATGGT GGCCCGTGAA
CTGGGCGTAA CCAGCAAAGA CGTACGTGAG ATGGAATCAC GTATGGCGGC ACAGGACATG
ACCTTTGACC TGTCTTCCGA CGACGATTCC GACAGCCAGC CGATGGCTCC GGTGCTCTAT
CTGCAGGATA AATCATCTAA CTTTGCCGAC GGCATTGAAG ATGATAACTG GGAAGAGCAG
GCGGCAAACC GTCTGACCGA CGCGATGCAG GGTCTGGACG AACGCAGCCA GGACATCATC
CGTGCGCGCT GGCTGGACGA AGACAACAAG TCCACGTTGC AGGAACTGGC TGACCGTTAC
GGCGTTTCCG CTGAGCGTGT ACGCCAGCTG GAAAAGAACG CGATGAAAAA ATTGCGTGCT
GCCATTGAAG CGTAA
 
Protein sequence
MTDKMQSLAL APVGNLDSYI RAANAWPMLS ADEERALAEK LHYHGDLEAA KTLILSHLRF 
VVHIARNYAG YGLPQADLIQ EGNIGLMKAV RRFNPEVGVR LVSFAVHWIK AEIHEYVLRN
WRIVKVATTK AQRKLFFNLR KTKQRLGWFN QDEVEMVARE LGVTSKDVRE MESRMAAQDM
TFDLSSDDDS DSQPMAPVLY LQDKSSNFAD GIEDDNWEEQ AANRLTDAMQ GLDERSQDII
RARWLDEDNK STLQELADRY GVSAERVRQL EKNAMKKLRA AIEA