Gene EcDH1_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0173 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp181929 
End bp183200 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content45% 
IMG OID 
Productserine transporter 
Protein accessionACX37867 
Protein GI260447445 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCACA ACACACTATC GAAACACAAT CAGAAATTGC CGTTTACACG CTACGACTTC 
GGCTGGGTTT TATTATGCAT AGGCATGGCG ATTGGTGCCG GAACCGTGCT GATGCCAGTA
CAAATTGGCT TGAAGGGAAT TTGGGTATTT ATTACCGCAG CGATCATTGC TTATCCTGCC
ACCTGGGTAG TGCAGGACAT TTATTTAAAA ACCCTTTCTG AAAGCGATTC CTGTAATGAC
TACACCGATA TTATCAGTCA TTACCTGGGG AAGAACTGGG GAATTTTCCT CGGGGTTATC
TACTTTTTGA TGATTATCCA CGGGATTTTT ATCTACTCTC TCTCCGTGGT TTTCGACAGC
GCCTCGTACC TGAAAACCTT CGGTTTAACC GATGCCGATC TTTCACAATC TCTACTTTAT
AAAGTCGCTA TTTTCGCCGT ACTGGTGGCG ATTGCGTCTG GTGGTGAACG ATTACTGTTT
AAGATTTCCG GGCCAATGGT GGTGGTCAAA GTAGGGATTA TTGTCGTGTT CGGTTTTGCG
ATGATCCCGC ACTGGAATTT CGCCAATATA ACCGCCTTCC CGCAAGCCTC CGTCTTTTTC
CGCGATGTCT TGCTTACCAT TCCATTTTGC TTCTTTTCTG CAGTATTTAT TCAGGTACTT
AACCCAATGA ATATTGCCTA TCGTAAACGG GAAGCGGATA AAGTACTGGC AACCCGGCTC
GCGCTGCGTA CCCACCGAAT TAGTTATATC ACGCTCATCG CGGTGATCCT GTTTTTTGCC
TTTTCGTTTA CCTTCTCAAT TAGCCACGAA GAAGCCGTTT CTGCCTTTGA ACAAAATATC
TCAGCACTGG CGCTGGCCGC GCAGGTGATC CCTGGGCATA TCATTCATAT CACCTCTACG
GTGCTTAATA TCTTTGCCGT ACTGACCGCA TTCTTTGGCA TTTATCTCGG TTTCCACGAG
GCCATTAAAG GCATTATTCT CAATCTGTTA AGCCGAATTA TTGATACCAA GAAAATTAAC
TCACGCGTGC TGACTCTGGC GATCTGCGCT TTTATCGTCA TTACGTTGAC GATTTGGGTT
TCGTTTCGTG TATCGGTGCT GGTGTTCTTT CAGTTGGGAA GCCCGTTATA TGGTATTGTG
TCGTGCCTCA TTCCGTTTTT CCTGATCTAT AAAGTCGCAC AACTGGAAAA ACTTCGCGGA
TTTAAAGCCT GGCTGATTCT GCTGTACGGC ATTTTGCTAT GCTTGTCGCC ACTGTTGAAG
CTGATTGAGT AA
 
Protein sequence
MQHNTLSKHN QKLPFTRYDF GWVLLCIGMA IGAGTVLMPV QIGLKGIWVF ITAAIIAYPA 
TWVVQDIYLK TLSESDSCND YTDIISHYLG KNWGIFLGVI YFLMIIHGIF IYSLSVVFDS
ASYLKTFGLT DADLSQSLLY KVAIFAVLVA IASGGERLLF KISGPMVVVK VGIIVVFGFA
MIPHWNFANI TAFPQASVFF RDVLLTIPFC FFSAVFIQVL NPMNIAYRKR EADKVLATRL
ALRTHRISYI TLIAVILFFA FSFTFSISHE EAVSAFEQNI SALALAAQVI PGHIIHITST
VLNIFAVLTA FFGIYLGFHE AIKGIILNLL SRIIDTKKIN SRVLTLAICA FIVITLTIWV
SFRVSVLVFF QLGSPLYGIV SCLIPFFLIY KVAQLEKLRG FKAWLILLYG ILLCLSPLLK
LIE