Gene EcDH1_0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0118 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp123902 
End bp125746 
Gene Length1845 bp 
Protein Length614 aa 
Translation table11 
GC content56% 
IMG OID 
Productselenocysteine-specific translation elongation factor 
Protein accessionACX37813 
Protein GI260447391 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATTG CGACTGCCGG ACACGTTGAC CACGGCAAAA CAACCTTATT GCAGGCGATT 
ACTGGCGTAA ATGCTGACCG TCTGCCGGAA GAAAAAAAGC GCGGCATGAC CATCGATCTC
GGCTATGCCT ACTGGCCGCA GCCGGATGGT CGCGTGCCTG GTTTTATCGA CGTTCCCGGT
CATGAAAAGT TTCTTTCCAA CATGCTGGCG GGCGTTGGTG GTATCGATCA CGCGCTGTTG
GTGGTGGCGT GCGATGACGG CGTGATGGCA CAGACCCGTG AGCATCTGGC GATTTTGCAG
CTGACCGGTA ACCCGATGCT GACAGTGGCG CTGACCAAAG CCGATCGCGT GGACGAAGCG
CGTGTTGATG AGGTTGAACG CCAGGTAAAG GAGGTTCTGC GGGAATACGG TTTTGCTGAG
GCAAAACTGT TTATCACCGC AGCAACCGAA GGTCGGGGAA TGGATGCCCT GCGCGAGCAT
CTGCTTCAGT TGCCGGAACG CGAGCACGCC AGCCAACATA GTTTCCGCCT CGCGATTGAC
CGCGCATTTA CCGTAAAAGG TGCCGGGCTG GTCGTCACCG GTACGGCGTT AAGCGGGGAA
GTGAAGGTAG GCGATTCACT CTGGCTGACT GGTGTAAATA AACCGATGCG TGTACGTGCG
CTGCATGCGC AAAACCAGCC AACAGAAACC GCCAATGCCG GGCAGCGTAT CGCGCTTAAC
ATCGCGGGTG ATGCGGAAAA AGAGCAGATT AACCGTGGCG ACTGGCTGCT TGCCGATGTG
CCGCCAGAGC CGTTCACACG GGTGATTGTC GAGCTTCAAA CCCATACACC GCTGACCCAG
TGGCAGCCGC TGCATATTCA CCACGCCGCC AGCCACGTCA CGGGACGCGT TTCACTGCTG
GAAGATAACC TTGCTGAACT GGTCTTCGAC ACCCCGTTAT GGCTGGCAGA TAACGACCGC
CTGGTATTGC GCGATATCTC TGCCCGCAAC ACGCTGGCCG GAGCGCGCGT CGTGATGCTT
AACCCGCCGC GTCGCGGTAA ACGTAAGCCG GAATATCTGC AATGGCTGGC GTCTCTTGCA
CGGGCGCAGA GCGATGCCGA TGCGTTATCT GTTCATCTGG AACGCGGCGC GGTTAACCTT
GCGGATTTCG CCTGGGCGCG CCAGCTCAAC GGCGAAGGGA TGCGCGAATT GCTGCAACAG
CCTGGTTATA TTCAGGCTGG TTATAGCTTG TTGAATGCGC CGGTTGCCGC CCGCTGGCAG
CGGAAAATTC TCGACACATT AGCGACTTAT CATGAGCAAC ATCGCGATGA ACCTGGCCCT
GGGCGCGAAC GTCTGCGACG TATGGCGTTG CCAATGGAAG ATGAAGCGCT GGTACTGTTG
CTGATTGAAA AGATGCGCGA AAGCGGCGAC ATCCACAGCC ATCACGGCTG GCTGCATCTG
CCAGATCACA AAGCGGGCTT CAGCGAAGAG CAGCAGGCCA TCTGGCAAAA AGCAGAGCCA
CTGTTTGGTG ACGAACCGTG GTGGGTGCGT GACCTGGCAA AAGAGACGGG AACCGACGAG
CAGGCAATGC GCCTGACTCT ACGCCAGGCG GCGCAGCAAG GAATAATTAC CGCGATCGTT
AAAGATCGTT ATTACCGTAA CGATCGGATT GTCGAGTTTG CCAATATGAT CCGCGATCTC
GATCAGGAGT GTGGTTCAAC CTGCGCGGCG GATTTCCGCG ATCGCTTAGG CGTAGGCCGA
AAGCTGGCAA TTCAGATTCT GGAATATTTT GACCGCATTG GCTTTACGCG TCGTCGTGGA
AATGATCATT TATTGCGCGA CGCATTATTA TTTCCGGAAA AATAA
 
Protein sequence
MIIATAGHVD HGKTTLLQAI TGVNADRLPE EKKRGMTIDL GYAYWPQPDG RVPGFIDVPG 
HEKFLSNMLA GVGGIDHALL VVACDDGVMA QTREHLAILQ LTGNPMLTVA LTKADRVDEA
RVDEVERQVK EVLREYGFAE AKLFITAATE GRGMDALREH LLQLPEREHA SQHSFRLAID
RAFTVKGAGL VVTGTALSGE VKVGDSLWLT GVNKPMRVRA LHAQNQPTET ANAGQRIALN
IAGDAEKEQI NRGDWLLADV PPEPFTRVIV ELQTHTPLTQ WQPLHIHHAA SHVTGRVSLL
EDNLAELVFD TPLWLADNDR LVLRDISARN TLAGARVVML NPPRRGKRKP EYLQWLASLA
RAQSDADALS VHLERGAVNL ADFAWARQLN GEGMRELLQQ PGYIQAGYSL LNAPVAARWQ
RKILDTLATY HEQHRDEPGP GRERLRRMAL PMEDEALVLL LIEKMRESGD IHSHHGWLHL
PDHKAGFSEE QQAIWQKAEP LFGDEPWWVR DLAKETGTDE QAMRLTLRQA AQQGIITAIV
KDRYYRNDRI VEFANMIRDL DQECGSTCAA DFRDRLGVGR KLAIQILEYF DRIGFTRRRG
NDHLLRDALL FPEK