Gene ECH_0705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_0705 
SymbolprfB 
ID3927613 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand
Start bp715006 
End bp716107 
Gene Length1102 bp 
Protein Length366 aa 
Translation table11 
GC content33% 
IMG OID637901826 
Productpeptide chain release factor 2, programmed frameshift 
Protein accessionYP_507510 
Protein GI88658024 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACGA AATCCTATGC TGATGAAGAG TTAGTAAGTT TAGGTAAGGC TTTACAGTTG 
ATTCGGGGTC ATCTTTGACA TTGACAATTT AACAAGTTTA TTAGCTGACC TTAGTCTGCA
GTGTTCTAGT ACGTCCCTGT GGGATGACAA TTCTTTAGCA CAACGTATTC TATGTGAACG
TGCTAGAATA TCTAAAACTC TAAACTCATT TACAGAATTA GAGGAAGAGT ATAATTATTA
TACTGAACTA TTATCCGTTA TAAATAATGA TACAGATGAA CTACTAAATG AGTTAGAAGC
AGGTTTAGCA AAATTAAAAG AAAAGGTTCA AAAAAAAGAA GTTGAATGTC TATTTTCTAA
TGAAGCAGAT CATAATGATT GCTTTATAGA GATTCAATCT GGAGCTGGAG GTACAGAAAG
CAATGATTGG TCTAGTATGC TTTTCCGAAT GTACGTAAGG TGGGCAGAAA TATACCATAA
TTTTAAAACA GAAATTGTCC ATAAGCTAGA TGGAGAAGAA GTAGGAGTAA AATCTGCTAC
TATAAAAGTA ATAGGAGATA ATGCATACGG GTGGGCAAAA ACTGAAAGTG GCATTCACAG
ACTAGTACGT ATCTCTCCTT TCAATTCAAA TGCTAAACGT CATACTACTT TCTCAAGTAT
ATTAGTTTCC CCAGTAATTA ATGAAGATAC TAATATTGAA ATCCTCGACA AAGATTTACG
AATAGATACA TACAGAGCAT CTGGAGCAGG AGGTCAACAC GTTAATAAAA CAGAAAGTGC
TGTACGTATT ACACATATAC CATCTGGAAT TGTAGTACAA TGCCAAAACA ATAGATCTCA
ACATCAAAAT TTAGCTGAAG CACATAATTT ACTAAAAAGC AGACTGTATC AACTAAAATT
ACAAGAGAAA GAAAAAAAAA TGGCAGAAGA ACACAACAAA AGATGCAATA TAGGATGGGG
TAATCAAATT AGATCATATG TTATGCATCC ATATCAAATG GTAAAGGATA TACGCACAGG
GCATGAAGTA GGTAATGTAA ATTCTGTATT AGATGGGAAC TTAGATTCAT TTATCATATC
AGCACTTACA ACAAAAATAT AA
 
Protein sequence
MITKSYADEE LVSLGKALQL IRGHLDIDNL TSLLADLSLQ CSSTSLWDDN SLAQRILCER 
ARISKTLNSF TELEEEYNYY TELLSVINND TDELLNELEA GLAKLKEKVQ KKEVECLFSN
EADHNDCFIE IQSGAGGTES NDWSSMLFRM YVRWAEIYHN FKTEIVHKLD GEEVGVKSAT
IKVIGDNAYG WAKTESGIHR LVRISPFNSN AKRHTTFSSI LVSPVINEDT NIEILDKDLR
IDTYRASGAG GQHVNKTESA VRITHIPSGI VVQCQNNRSQ HQNLAEAHNL LKSRLYQLKL
QEKEKKMAEE HNKRCNIGWG NQIRSYVMHP YQMVKDIRTG HEVGNVNSVL DGNLDSFIIS
ALTTKI