| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0561 |
|---|
| Symbol | |
|---|
| ID | 3927181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia chaffeensis str. Arkansas |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007799 |
|---|
| Strand | + |
|---|
| Start bp | 564222 |
|---|
| End bp | 567320 |
|---|
| Gene Length | 3099 bp |
|---|
| Protein Length | 1032 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 637901683 |
|---|
| Product | AcrB/AcrD/AcrF family protein |
|---|
| Protein accession | YP_507373 |
|---|
| Protein GI | 88658157 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.38553 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAGA TTGCTGAGAT ATTCTTACAA AGGAATAGAG TATCGATATT TCTGTTGATG
GTTATATTGA TATTTGGTTG TTATTCTTAT TTTTATATTC CCAAAGAAAA GAATCCTGAA
ATTAAAAAAC CTATTTTATC TATTCATACT ACATTGCAAG GGATGTCATC TGAAGATGTA
GAGAAATTTT TAGTGTATCC TATTGAACAA GAGATAAAAT CTGTGAAGGG TATTAGTAGA
ATTACTTCGA TGGCTAAAAA CGGCTATGCA AATGTAATAT TAGAATTTAG TGCAGGATTT
AACCATAGAG AAGCTTTAGA AAATGTAAGA TCAAAAGTGG ATGTGATACG TGCTAAATTG
CCTCAAGAAG CAACCTTTCC TATAATAAAT GAAGAGAATT TTAGCTTATT TCCAGTGTTA
AGTATAGCTT TAGTTAGTGA TTTACCTAAC AGGACATTGT TTAAAGTTGC AAGTGATTTG
CAATCTAGAT TGGAAAGTTT ACCTAATATA GAAAGTGTTA AGATTATTGG AAATAGTAAA
GATATTATTG AGATAAATAT TTCTCCTGGT GTTATTAATA GCTATAACTT GCAAATGCAA
GATGTGATAA TGGCTGTATT GAATAATAAT CAGTTTCTGA ATATTGGAAA TTTGGACTCT
ACAGTTGGTA AATATACACT GCATTTGTCA GGTATTTTAA AGAATATAGA GGACATTATG
AATATACCAG TAAAAACTGA TGGTTATTCT GTTGTAACTG TAGGTGATAT TGCTACTATA
AAGCCAATTT ATCAAGATAA TAAGGAATTT GTTCGAGTAA ATAATCAGCC ATGTTTAGTT
CTAGAAATAT CAAAGCAAAC TGGTAAGAAT ATTATTGAGA CTATCTCTCA AGTAAAAGAA
CTTATGAATA ATCTCAAAAA TATATTGCCA AACAATTTAT CAGTTATTTA TCTTCAAGAT
GAATCGGAAG AGATATCGAA TGTTTTAAAT GAATTACAGA ATTCTATTTT AATTTCAGTT
TTATTAGTTG TGATAATTAT GATGGTATTT ATGGGAACTA AGACTGCATT GTTAGTTGCC
GTATCAATAC CTGGGTCTTT CTTGTTTGGT ATTATCATTA TGTATTTATT AGGGTATACC
TTAAATATAG TAATTTTATT TTCTTTGATT ATGGCTGTTG GAATGCTTGT TGATGATGCC
ATAGTTGTTA CTGAGTATGC AGATAGAAAA ATGATAGGTG GTTTGAATAA AATGGAAGCT
TTTAAGCAAG CTGCACATGA TATGTTTTGG CCAGTTGCAT CGGCTACTTT AACAAAATTA
GTAGTATATA TTCCATTGTT GTTTTGGCCT GGCACTACTG GGGAATTTAT GAAGTATATT
CCTATTGCAT TAATCACAAC TTTAAGTGGT TCGTGGATTA TGGCTTTGAT TTTTATTCCA
GTTTTAGGAT CTCTTATTGG AATGCCATCA GTGACTGATA AAAAAAGTGT AGCAGAAATT
ATAGCGATAA ATACTGGTGA TTTTGTACAT TTGGGTAGAT TTACCAGAGG TTATAGTAGA
ATTTTAAATA ATGTACTTAA TCATCCTAAA AAATTTGTTT GTGTAATAGT TAGCATATTG
TTTTTCTCTA CGTTTGGATA TTTTATGGTT GGTCCGGGTG TAGAGTTTTT TCCAAATATT
GAATCAGAAA GAATGCTTAT CACTATAAGA TCAAATAATA ATTTATCTGT CCATGAAAGG
AATGACATAT TGCGAGAAGT TGAACAACGG ATTTCTGATA TAGGTGGGAT AAAATTTTTT
TATGTAAAAG CTGGTCTGTT TGAGTATTCA TTGGATGTCG ATAATGTTAT TGGAAAAATT
CAGGTGGAAT TAAAAAAATG CTCTATTTGT AGGAAGTCTG ACAAAATATT AAATGAGATA
AGAAATAAGC TACAAGATGT GAAAGGTGTT ATTATAAATA TTGTGGAAGA AAGAATGAAA
CCAGTCACTG GTAAGCCAAT ACGTATTGAT ATTAGTTCAC GTAATGTAAA TAAGATTAAT
GATACAACGG ATAAGATAAT ATCTATTATG AATAATTCTT TAGGATTTGA AAATGTTACA
GACAATAGAT CATCTTTAGA AATAGAGTGG AAAATTGATA TTGATAAAAA CAAGGCAATG
AGATCTGGGG TTGATATTTC TATACTTAGC AAATTTATAA AAATGATAGC TGGAGGAGTA
TTATTAAATA GGTATCACCC AGATAATATT AATGATGAAG TAGATATTAT TCTCAGATTT
CCTAAGGAAT ATCGTAATTT AAATACGTTG AGTAATCTGT TTGTTAATAC TTTACATGGA
TATACTGCTG TTAGTGATTT TATTATTCAT AAAGCTCAAC GTAAAGAAGG TGGAATAAAT
CATATTAATG GTATAAGAAC AGTAAGTATT ATGGCTGATT TATCTCAAGG GTATTTATTA
GAAAAGATGA TCAATTTTTT AAATCAAAAA TTTAAAGAGG AATTAGATTC AGAGGTATTG
GTTGAAATAA AAGGAGAAAT AAAAGATCAA GAAGAATCAC AAAAATTTTT AATTAAAGCA
TTTGTTATAA TAGTAGTACT TATTATGTTG GTTCTAATTA CTGAGTTTAA CAGTATTTAT
AATACATTAA TTATTATGAC AGCTATTTTT CTATCAACTA CTTGTATATT TTTTGGATTT
TTTATCACAA GTCATGTTTT TTCTGTAGTT ATGGGAGGAG TAGGTATTAT TGTATTGGCT
GGTGTAATAG TAAATAATAA TATTCTGCTT CTTGATGCCT TTTATATTAA TATGAATACT
ATATGTAATA AAAAAGAAGC TATAGTAAGA GCAGCTTTAT CTAGAGTTAG GCCAATATTA
TTGACAGTTG TTACTGGGAT TATTGGATTG GTTCCTATGA TGTTACGTGT AAGTTTTGAT
TTTATTAATC GGCAAGTTAT TTATAATTCA CCGTCAAGCC AGCTTTGGTT TGAATTATCT
TATACTATAG CTATTGGTTT ATGTTTAGCT ACTGTGATTA CTTTATTTTT TACTCCTGCG
TTGCTTATGA TAGGGAAATA TAATAAAATT AACAAATGA
|
|---|
| Protein sequence | MRKIAEIFLQ RNRVSIFLLM VILIFGCYSY FYIPKEKNPE IKKPILSIHT TLQGMSSEDV
EKFLVYPIEQ EIKSVKGISR ITSMAKNGYA NVILEFSAGF NHREALENVR SKVDVIRAKL
PQEATFPIIN EENFSLFPVL SIALVSDLPN RTLFKVASDL QSRLESLPNI ESVKIIGNSK
DIIEINISPG VINSYNLQMQ DVIMAVLNNN QFLNIGNLDS TVGKYTLHLS GILKNIEDIM
NIPVKTDGYS VVTVGDIATI KPIYQDNKEF VRVNNQPCLV LEISKQTGKN IIETISQVKE
LMNNLKNILP NNLSVIYLQD ESEEISNVLN ELQNSILISV LLVVIIMMVF MGTKTALLVA
VSIPGSFLFG IIIMYLLGYT LNIVILFSLI MAVGMLVDDA IVVTEYADRK MIGGLNKMEA
FKQAAHDMFW PVASATLTKL VVYIPLLFWP GTTGEFMKYI PIALITTLSG SWIMALIFIP
VLGSLIGMPS VTDKKSVAEI IAINTGDFVH LGRFTRGYSR ILNNVLNHPK KFVCVIVSIL
FFSTFGYFMV GPGVEFFPNI ESERMLITIR SNNNLSVHER NDILREVEQR ISDIGGIKFF
YVKAGLFEYS LDVDNVIGKI QVELKKCSIC RKSDKILNEI RNKLQDVKGV IINIVEERMK
PVTGKPIRID ISSRNVNKIN DTTDKIISIM NNSLGFENVT DNRSSLEIEW KIDIDKNKAM
RSGVDISILS KFIKMIAGGV LLNRYHPDNI NDEVDIILRF PKEYRNLNTL SNLFVNTLHG
YTAVSDFIIH KAQRKEGGIN HINGIRTVSI MADLSQGYLL EKMINFLNQK FKEELDSEVL
VEIKGEIKDQ EESQKFLIKA FVIIVVLIML VLITEFNSIY NTLIIMTAIF LSTTCIFFGF
FITSHVFSVV MGGVGIIVLA GVIVNNNILL LDAFYINMNT ICNKKEAIVR AALSRVRPIL
LTVVTGIIGL VPMMLRVSFD FINRQVIYNS PSSQLWFELS YTIAIGLCLA TVITLFFTPA
LLMIGKYNKI NK
|
|---|
| |