| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0455 |
|---|
| Symbol | |
|---|
| ID | 3926960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia chaffeensis str. Arkansas |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007799 |
|---|
| Strand | - |
|---|
| Start bp | 432655 |
|---|
| End bp | 433458 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637901579 |
|---|
| Product | putative geranyltranstransferase |
|---|
| Protein accession | YP_507273 |
|---|
| Protein GI | 88657808 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.765692 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATC ATAGTAGCTT ACTCGTCAAA CAACTAGAAA GTATTCTACC AGAAAATAAT
CAAGATATAT TATTAACATC CATGAGGTAT TCTATGTTTG CACCTGGCAA GCATATACGT
CCTTTTCTCG TTAATGCTTC TGCCCAAATA TTCAACGTTA ATGTAGATAG AATTCTACCT
GTCAGTGCAG CTGTAGAAAT TATACATGTT TATTCATTAA TACATGATGA TTTACCAGGT
ATAGATAACG AAAACATACG TCGAGGACAA GCAAGTTCCC ACAAAAAATT TAACGAAGCA
ATTGCAATAT TAACTGGTGA CGCACTATTA ACTCTAGCAT TTGAAATATT ATCAACAATT
GATGAATCAC CATTTATACG TTGCTGTATG ATAAAAGCAT TAGCTAAAGC TTTAGGTTAT
CAAGGCATGA TACAAGGACA AATACTTGAT ACAGAAACTA TAGCAAAAGA CACAAATGAT
ATACAAGCCA TCCACGTGTT GAAAACAGCC CAATTTTTCT CTGTAGCATG TGAATTAGGA
GGAATATTAG GGAATGCATC AAATATTGAA TTAAATGCTC TAGCTAACTA CGGATTAAAC
CTTGGACATG CTTTTCAAGT AAAAGATGAC ATTGCTGACG CAAATCAGGA TAAATCAAAA
AACAACATCC TCAATATATT AAATAACGAA GATGCTCAAA ACTATCTTAA TAGCTTGATA
GACAAATCTA TCGAACATTT AACTATTCTT TCACATAAAG CAGATATCCT ACACAGTTTA
GCTGAGTTTA TAAGAAATTT ATAA
|
|---|
| Protein sequence | MKHHSSLLVK QLESILPENN QDILLTSMRY SMFAPGKHIR PFLVNASAQI FNVNVDRILP
VSAAVEIIHV YSLIHDDLPG IDNENIRRGQ ASSHKKFNEA IAILTGDALL TLAFEILSTI
DESPFIRCCM IKALAKALGY QGMIQGQILD TETIAKDTND IQAIHVLKTA QFFSVACELG
GILGNASNIE LNALANYGLN LGHAFQVKDD IADANQDKSK NNILNILNNE DAQNYLNSLI
DKSIEHLTIL SHKADILHSL AEFIRNL
|
|---|
| |