| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0157 |
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| Symbol | ispD |
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| ID | 3927220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ehrlichia chaffeensis str. Arkansas |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007799 |
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| Strand | - |
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| Start bp | 147705 |
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| End bp | 148415 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 637901281 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_506984 |
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| Protein GI | 88657713 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCACAAGT TCACACTGTT AATTGTTGCA GCTGGTAACA GTAATAGATT TAAATGGAGT
GCTATTCCTA AACAATATTG TTCATTAGGT AATCATAATA TACTTTGCAG TACAATTAAT
AATATGATCT CACATCCTAA GATTAATTAC GTCAAAGTAG TCATTAGAAA AGAGCACCAA
CATTTATATG ATAATTGCTT ACAAAAAATA CAAAATGATA AACTATTACC TCCTACCTAT
GGAGGAAAAA GAAGACAGGA TTCTGTACGT ATGGGATTAG AGAGCATTCA AAATATAAAT
CCATATTTTG TCATAATACA TGATGCATGT CGCCCATTTA TAGATTTAAA GATATTAGAT
ACAATGGAAT CAATACTAAC TCATTATGCA GGGGTTGTTC CAGTACTTTC AATAACCGAT
ACTATTCATG TAGTACATGA AAACAAGACT GTTATTCAAA ATGTTGACAG GAACAGTATT
AAATTAATCC AAACACCACA AGCATATAAA TATAGCGAAA TACTACTACA TCATAGAATT
GCATATAATA CTGAACCCAA CAGAGAATTT CCAGATGAAT CATCTCTTAT GATACATTAC
AACATACCAA TAATGACAAC TGAAGGAGAT TACAACAATT TTAAAATTAC AACTATAGAA
GATTTACATA GAGCAATCTT ATATACCAAA CATATAGATC ACAATTATTA A
|
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| Protein sequence | MHKFTLLIVA AGNSNRFKWS AIPKQYCSLG NHNILCSTIN NMISHPKINY VKVVIRKEHQ
HLYDNCLQKI QNDKLLPPTY GGKRRQDSVR MGLESIQNIN PYFVIIHDAC RPFIDLKILD
TMESILTHYA GVVPVLSITD TIHVVHENKT VIQNVDRNSI KLIQTPQAYK YSEILLHHRI
AYNTEPNREF PDESSLMIHY NIPIMTTEGD YNNFKITTIE DLHRAILYTK HIDHNY
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