Gene ECH_0137 details

Gene Information

• Locus tag: ECH_0137
• Symbol: ccmF
• ID: 3927494
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ehrlichia chaffeensis str. Arkansas
• Kingdom: Bacteria
• Replicon accession: NC_007799
• Strand: +
• Start bp: 127065
• End bp: 129002
• Gene Length: 1938 bp
• Protein Length: 645 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 637901261
• Product: cytochrome c-type biogenesis protein CcmF
• Protein accession: YP_506965
• Protein GI: 88657620
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1138] Cytochrome c biogenesis factor
• TIGRFAM ID: [TIGR00353] c-type cytochrome biogenesis protein CcmF

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.021229
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTAGTT TAATAGAGCT CCCGCTTTTA ATGGCGTGTG TATTTTCAGT AGTTTATCCA 
TTTGTTGTTA ATATATCTTT CTGTTGGTCG AAAGTACTGA CAATGTTGAT ATTTATACTG 
ACAAGTTCTG CTGTTGGATT GTTGTTGTAT ATACACATTG TTGATGATTT TTCATTTTGT 
AATGTATACT ATAATTCACA TACGACTAAA CACTTATTGT ATAAAATATT TGGTATTTGG 
GGTAATTATG AAGGTTCTAT TCTATTGTGG GTGTGGATAA TAAGTCTATA TAGTTTATTA 
TTAGAGATTT TACTTGATAA AGATGATTTC AAAAGAATAT CCATTTCAAT ACAACATGTA 
ATTAACTTTG GATTCTTGTT ATTTACCTTG GTAGCATCTA ATCCTTTTAT GAAGATGCCT 
ACTGTTGAAT ATGAAGGATT GGGCTTTAAT CCTATATTAC AGGATACAGG GTTAATGGTG 
CATCCTCCTA TTTTATATTT AGGATATGTA GGATTTAGTG TAGTATTCTC ACTTGCTGTA 
GCTGGGATAA TTCTCCAAAA AGATAGTGTA GAATGGGCAA TGATTATAAA TAAATGGGCT 
CTAGTTGCAT GGTCTTTTTT GACTTTAGGA ATAGGATTAG GTAGTTGGTG GGCATATCGA 
GAATTAGGTT GGGGAGGATT TTGGTTTTGG GATCCAGTTG AGAATGTATC ACTTATGCCA 
TGGTTACTGG GTACAGCTTT AATTCATTTA CTGCCTTTAG TGAGAAAATT TAACCTGTTC 
TATAATTCTG CAGTTTTATT ATCAATTTGT TCGTTTGTAA TGAGTCTAAT TGGTACATTT 
TTAGTAAGGT CTGGTGTTTT GGTATCTGTT CATACTTTTG CTAATGATCC AGAACATGGA 
TTCTATATAT TAATGTTAAT TGGAATAATA ATTAGTAGTG GAATAATAAG TTTTATTTGT 
TTTACGAAGA AAACTCAGAA AAGAGAATAT GATTTTTTAT TGTTATCGAA AGTTACAATG 
TTGTTGTTCA ACAATGTTCT ACTGTTAACA GCATTTGCTA TAGTGTTTAT TGGTACTATA 
TATCCTGTTA TATTAGAGTT TATCACTGGA GATGTTATTG CTGTAGGAGC TCCATATTAT 
AATACTCTAT TTAATTATTT GATATTCTGT ACTTTAATAT TAATGATAAT TACTTTAGGA 
TTGGATGAGG AAAGAAATAA AATTTTAATA AAGAATTTCA AGTTTTCTGG ATTTGTAGTT 
TTATTGATTT TTCCTTTCAT GATAGATAAT AATTTTTTTA TTGTTTTAAT ACTTTTATTA 
TCAGTTTTTT TATTTTTATC AGTGTTGGAA GCATACTATA GAAAAATAAA AATATTTACA 
GTGTCATTTT CTGAAACTAT AAAATTGGCT AAATCTTGCT CTAAAAAATA TTATTCTATG 
CTAATAGCAC ATATGGGTGT TGCTGTATTT ATGTTTGGAA TCATTGGTTC TATTGTATGG 
GGTGAAACCT ATGAACTTTA TATGAAGGAC AATAGTTTGA TTAATGTAAA AAACTTTCAA 
GTTGTTTTAT CTGGATTATC TTTTGTAAAA AATAAAAATT ACGATGCTAT TCGTGGAAGA 
TTTTTAATAG TAAAATCTGG TGAAGTGTTG GGTAAAGTAT TTCCTGAAAA TAGGTTCTAT 
GTAGTTGAGG GAGTAAGAAA TGCTGAAAGT GCTATATATC GACATTGGCT ATCTGATATT 
TATATTGTAA TTGGTGATAT AGATAAGGTG AAAGGTATAG CAGTAAAAGT GTATTATAAA 
CCTTATATAA ATTTAATATG GATGGGATTT TTGTTAGTAG CATTTGGTGG CGTTATAGGA 
TTGTTATCTA GTCATATTAT TACAAAGAAA TCTTTAGTAC TTGAAACATC AAAAACCAAT 
GGTGCTTCTT GTACATGA 

 

Protein sequence

MVSLIELPLL MACVFSVVYP FVVNISFCWS KVLTMLIFIL TSSAVGLLLY IHIVDDFSFC 
NVYYNSHTTK HLLYKIFGIW GNYEGSILLW VWIISLYSLL LEILLDKDDF KRISISIQHV 
INFGFLLFTL VASNPFMKMP TVEYEGLGFN PILQDTGLMV HPPILYLGYV GFSVVFSLAV 
AGIILQKDSV EWAMIINKWA LVAWSFLTLG IGLGSWWAYR ELGWGGFWFW DPVENVSLMP 
WLLGTALIHL LPLVRKFNLF YNSAVLLSIC SFVMSLIGTF LVRSGVLVSV HTFANDPEHG 
FYILMLIGII ISSGIISFIC FTKKTQKREY DFLLLSKVTM LLFNNVLLLT AFAIVFIGTI 
YPVILEFITG DVIAVGAPYY NTLFNYLIFC TLILMIITLG LDEERNKILI KNFKFSGFVV 
LLIFPFMIDN NFFIVLILLL SVFLFLSVLE AYYRKIKIFT VSFSETIKLA KSCSKKYYSM 
LIAHMGVAVF MFGIIGSIVW GETYELYMKD NSLINVKNFQ VVLSGLSFVK NKNYDAIRGR 
FLIVKSGEVL GKVFPENRFY VVEGVRNAES AIYRHWLSDI YIVIGDIDKV KGIAVKVYYK 
PYINLIWMGF LLVAFGGVIG LLSSHIITKK SLVLETSKTN GASCT