Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5906 |
Symbol | |
ID | 6966645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 5559278 |
End bp | 5560945 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643389521 |
Product | putative ABC transporter ATP-binding protein |
Protein accession | YP_002273912 |
Protein GI | 209400314 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTCAAT TCGTTTATAC CATGCATCGT GTCGGCAAAG TTGTTCCGCC GAAACGTCAT ATTTTGAAAA ACATCTCTCT GAGTTTCTTC CCTGGGGCAA AAATTGGTGT CCTGGGTCTG AACGGCGCGG GTAAGTCCAC CCTGCTGCGC ATTATGGCGG GCATTGATAA AGACATCGAA GGTGAAGCGC GTCCGCAGCC AGACATCAAG ATTGGTTATC TGCCGCAGGA ACCGCAGCTG AACCCGGAAC ACACCGTACG TGAGTCCATT GAAGAAGCGG TTTCAGAAGT GGTTAACGCC CTGAAACGCC TGGATGAAGT GTATGCGCTG TACGCCGATC CGGATGCCGA TTTTGACAAG CTGGCCGCTG AACAAGGCCG TCTGGAAGAG ATCATTCAGG CTCACGACGG TCATAATCTG AACGTACAGC TGGAGCGTGC GGCGGATGCG CTACGTCTGC CGGACTGGGA CGCGAAAATC GCTAACCTCT CCGGTGGTGA GCGTCGTCGC GTGGCGTTGT GCCGCCTGCT GCTGGAAAAA CCAGACATGC TGCTGCTCGA CGAACCGACC AACCACCTGG ATGCCGAATC CGTGGCCTGG CTGGAACGCT TCCTGCACGA CTTCGAAGGC ACCGTGGTGG CGATTACCCA CGACCGTTAC TTCCTCGATA ACGTTGCGGG CTGGATCCTC GAACTTGACC GCGGTGAAGG TATTCCGTGG GAAGGTAACT ACTCCTCCTG GCTGGAGCAG AAAGATCAGC GTCTGGCGCA GGAAGCTTCA CAAGAAGCGG CGCGTCGTAA GTCGATCGAG AAAGAGCTGG AGTGGGTACG TCAGGGAACT AAAGGCCGCC AGTCGAAAGG TAAAGCACGT CTGGCACGCT TTGAAGAACT GAACAGCACC GAATATCAGA AACGTAACGA AACCAACGAA CTGTTTATTC CACCTGGACC GCGTCTGGGC GATAAAGTGC TGGAAGTCAG CAACCTGCGT AAATCCTATG GCGATCGTCT GCTGATTGAT GACCTGAGCT TCTCGATCCC GAAAGGAGCG ATCGTCGGGA TCATCGGTCC GAACGGTGCG GGTAAATCGA CCCTGTTCCG TATGATCTCT GGTCAGGAAC AGCCGGACAG CGGCACCATC ACTTTGGGTG AAACGGTGAA ACTGGCGTCG GTTGATCAGT TCCGTGACTC AATGGATAAC AGCAAAACCG TTTGGGAAGA AGTTTCCGGC GGGCTGGATA TCATGAAGAT CGGCAACACC GAGATGCCAA GCCGCGCCTA CGTTGGCCGC TTTAACTTTA AAGGGGTTGA TCAGGGTAAA CGCGTTGGTG AACTCTCCGG TGGTGAGCGC GGTCGTCTGC ATCTGGCGAA GCTGCTGCAG GTTGGCGGCA ACATGCTGCT GCTCGACGAA CCAACCAACG ACCTGGATAT CGAAACCCTG CGCGCGCTGG AAAACGCCCT GCTGGAGTTC CCGGGCTGTG CGATGGTTAT CTCGCACGAC CGTTGGTTCC TCGACCGTAT CGCCACGCAC ATTCTGGATT ACCAGGATGA AGGTAAAGTT GAGTTCTTCG AAGGTAACTT TACCGAGTAC GAAGAGTACA AGAAACGCAC GCTGGGCGCA GACGCGCTGG AGCCGAAGCG TATCAAGTAC AAGCGTATTG CGAAGTAA
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Protein sequence | MAQFVYTMHR VGKVVPPKRH ILKNISLSFF PGAKIGVLGL NGAGKSTLLR IMAGIDKDIE GEARPQPDIK IGYLPQEPQL NPEHTVRESI EEAVSEVVNA LKRLDEVYAL YADPDADFDK LAAEQGRLEE IIQAHDGHNL NVQLERAADA LRLPDWDAKI ANLSGGERRR VALCRLLLEK PDMLLLDEPT NHLDAESVAW LERFLHDFEG TVVAITHDRY FLDNVAGWIL ELDRGEGIPW EGNYSSWLEQ KDQRLAQEAS QEAARRKSIE KELEWVRQGT KGRQSKGKAR LARFEELNST EYQKRNETNE LFIPPGPRLG DKVLEVSNLR KSYGDRLLID DLSFSIPKGA IVGIIGPNGA GKSTLFRMIS GQEQPDSGTI TLGETVKLAS VDQFRDSMDN SKTVWEEVSG GLDIMKIGNT EMPSRAYVGR FNFKGVDQGK RVGELSGGER GRLHLAKLLQ VGGNMLLLDE PTNDLDIETL RALENALLEF PGCAMVISHD RWFLDRIATH ILDYQDEGKV EFFEGNFTEY EEYKKRTLGA DALEPKRIKY KRIAK
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