Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5890 |
Symbol | |
ID | 6972051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 5544081 |
End bp | 5545154 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643389507 |
Product | phospholipase, patatin family |
Protein accession | YP_002273898 |
Protein GI | 209398730 |
COG category | [R] General function prediction only |
COG ID | [COG4667] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.547138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGCAGC GAATACCTGT AACGCTTGGT AATATTGCGC CGTTGTCGCT AAGGCCGTTC CAGCCTGGAC GAATAGCTCT GGTGTGCGAA GGCGGCGGAC AGCGTGGAAT TTTCACGGCT GGCGTGCTGG ATGAGTTTAT GCGCGCGCAG TTTAATCCTT TCGATCTTTA TCTCGGCACA TCTGCCGGGG CGCAGAACCT CTCGGCGTAT ATCTGCAATC AGCCCGGTTA CGCGCGCAAA GTCATCATGC GCTATACCAC AAAACGCGAA TTTTTCGATC CATTGCGCTT TGTCCGTGGA GGAAATCTTA TCGATCTCGA CTGGCTGGTG GAGGCCACCG CAAGCCAGAT GCCGTTGCAA ATGGATACCG CCGCGCGGTT GTTTGACAGC GGCAAATCGT TTTATATGTG CGCCTGTCGT CAGGATGACT ACGCGCCGAA TTACTTTTTA CCAACCAAAC AAAACTGGCT GGATGTGATT CGCGCCTCCA GTGCGATACC TGGCTTTTAT CGTAGCGGAG TGTCGCTGGA AGGCATTAAC TACCTGGATG GCGGGATCAG TGATGCGATT CCGGTTAAAG AGGCGGCAAG GCAGGGCGCT AAAACGTTGG TCGTCATCCG CACTGTGCCG TCACAAATGT ACTACACGCC GCAGTGGTTC AAACGCATGG AACGCTGGCT GGGTGACAGT AGCCTGCAGC CGCTGGTCAA TCTGGTGCAG CATCATGAAA CCAGCTATCG TGACATTCAG CAATTTATTG AGAAACCACC GGGCAAGCTG CGGATATTCG AAATTTATCC GCCGAAGCCA TTACATAGTA TCGCGCTTGG CAGTCGGATT CCGGCGCTGC GTGAAGACTA TAAACTTGGG CGTTTATGCG GTCGTTATTT CCTCGCCACG GTTGGCAAGC TATTAACTGA AAAAGCGCCG CTTACCCGCC ATCTGGTGCC AGTGGTGACG CCGGAATCGA TTGTCATTCC GCCTGCGCCA GTCGCCAACG ATACGCTGGT TGCCGAAGTG AGCGACGCTC CGCAGGCGAA CGACCCGACA TTTAACAATG AGGATCTGGC TTGA
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Protein sequence | MGQRIPVTLG NIAPLSLRPF QPGRIALVCE GGGQRGIFTA GVLDEFMRAQ FNPFDLYLGT SAGAQNLSAY ICNQPGYARK VIMRYTTKRE FFDPLRFVRG GNLIDLDWLV EATASQMPLQ MDTAARLFDS GKSFYMCACR QDDYAPNYFL PTKQNWLDVI RASSAIPGFY RSGVSLEGIN YLDGGISDAI PVKEAARQGA KTLVVIRTVP SQMYYTPQWF KRMERWLGDS SLQPLVNLVQ HHETSYRDIQ QFIEKPPGKL RIFEIYPPKP LHSIALGSRI PALREDYKLG RLCGRYFLAT VGKLLTEKAP LTRHLVPVVT PESIVIPPAP VANDTLVAEV SDAPQANDPT FNNEDLA
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