Gene ECH74115_5845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5845 
Symbol 
ID6967407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp5496805 
End bp5497647 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content44% 
IMG OID643389467 
ProductSdiA-regulated protein 
Protein accessionYP_002273859 
Protein GI209395762 
COG category[S] Function unknown 
COG ID[COG3204] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.539509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAAGC GCATCACCTT TATCGTTTTT CTTTGCGCCA TCGTGGCGGC AAGCCTGTTT 
TTTGTGCAAT CCTGCGTCCG TAAAAGCCAG CATGTCGCAG GGTTTCAGAA TTATCAGGCC
ACTATCGATG GTAAAGAGAT TACAGGAGTA ACTAAAAATA TCTCCTCACT GACCTGGTCA
GCGCAGAGCA ATACCTTATT TAGCACTATC AACAAACCTG CAACCATCGT TGAAATGACG
ACCGAGGGCG ACTTGATCCG CACCATTCCG CTCGATTTTG TTAAGGATCT CGAGACGATT
GAATACATTG GTGATAATAA ATTTGTCATC AGTGATGAAC GTGACTACGC CATTTATGTG
ATTTCACTTA ACGCTGACTC GGAAGTGAGC ATCCTCAAAA AAATTAAAAT CCCATTGCAG
GAAACACCAA CTAACTGTGG CTTTGAAGGG CTGGCTTACT CCTCTCAGGA CCATACCTTC
TGGTTTTTTA AAGAGAAAAA TCCGATAGAG GTCTACAAAG TAACCGGGCT ATTGCGTAGC
GATGAGTTGC ATATCAGCAA AGATAAAACG TTGCAGCGTC AGTTTACTTT AGACGATGTT
TCTGGCGCGG AATTTAACCC ACAGAAAAAT ACGTTGCTGG TGTTGTCACA TGAGTCACGC
GCCCTGCAGG AAGTGACCGT GAGAGGTGAC GTGATCGGCG AAATGTCGTT AACCAAAGGT
AAGTATGGCC TTTCACACAA CATCAAGCAG GCGGAAGGGA TAGCGATGGA TGATAGCGGC
AACATCTATA TCGTTGGCGA ACCGAATCTT TTTTATCGCT TTACGTCGAC AAAATCACGA
TAA
 
Protein sequence
MKKRITFIVF LCAIVAASLF FVQSCVRKSQ HVAGFQNYQA TIDGKEITGV TKNISSLTWS 
AQSNTLFSTI NKPATIVEMT TEGDLIRTIP LDFVKDLETI EYIGDNKFVI SDERDYAIYV
ISLNADSEVS ILKKIKIPLQ ETPTNCGFEG LAYSSQDHTF WFFKEKNPIE VYKVTGLLRS
DELHISKDKT LQRQFTLDDV SGAEFNPQKN TLLVLSHESR ALQEVTVRGD VIGEMSLTKG
KYGLSHNIKQ AEGIAMDDSG NIYIVGEPNL FYRFTSTKSR