Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5828 |
Symbol | uxuA |
ID | 6971872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 5480106 |
End bp | 5481290 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643389455 |
Product | mannonate dehydratase |
Protein accession | YP_002273847 |
Protein GI | 209398734 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1312] D-mannonate dehydratase |
TIGRFAM ID | [TIGR00695] mannonate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.153738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAGA CCTGGCGCTG GTACGGCCCA AACGATCCGG TTTCTTTAGC TGATGTCCGT CAGGCGGGCG CAACTGGCGT GGTTACCGCG CTGCACCATA TCCCGAACGG CGAAGTATGG TCCGTAGAAG AGATCCTCAA ACGCAAGGCG ATCGTTGAAG ACGCAGGCCT GGTGTGGTCT GTCGTAGAAA GCGTACCAAT TCACGAAGAT ATCAAAACCC ACACTGGCAA CTATGAGCAG TGGATCGCTA ACTATCAGCA GACTCTGCGC AACCTGGCGC AGTGCGGCAT TCGCACCGTG TGCTACAACT TCATGCCGGT GCTCGACTGG ACCCGTACTG ACCTCGAATA CGTGCTGCCA GACGGCTCCA AAGCTCTGCG CTTCGACCAG ATCGAATTCG CTGCATTCGA AATGCATATC CTGAAACGTC CAGGCGCGGA AGCGGATTAC ACCGAAGAAG AAATTGCTCA GGCAGCTGAA CGCTTCGCCA CTATGAGCGA TGAAGACAAA GCGCGTCTGA CCCGTAACAT CATCGCTGGT CTGCCAGGTG CGGAAGAAGG GTACACCCTC GACCAGTTCC GTAAGCACCT GGAGCTGTAC AAAGATATCG ACAAAGCCAA ACTGCGCGAA AACTTTGCTG TCTTCCTGAA AGCGATTATT CCGGTTGCCG AAGAAGTTGG CGTCCGTATG GCTGTTCACC CGGACGATCC GCCGCGCCCG ATCCTCGGCC TGCCGCGCAT TGTTTCCACC ATTGAAGATA TGCAGTGGAT GGTTGATACC GTAAACAGCA TGGCGAACGG TTTCACCATG TGCACCGGTT CCTACGGCGT GCGTGCTGAC AACGATTTGG TTGATATGAT CAAGCAGTTC GGTCCGCGTA TTTACTTCAC CCATCTGCGC TCCACCATGC GTGAAGATAA CCCGAAAACC TTCCACGAAG CGGCGCACCT GAACGGTGAC GTTGATATGT ACGAAGTGGT GAAAGCGATT GTTGAAGAAG AACACCGTCG TAAAGCGGAA GGCAAAGAAG ACCTGATCCC GATGCGTCCG GACCACGGTC ATCAGATGCT GGACGACCTG AAGAAGAAAA CCAACCCTGG TTACTCCGCA ATTGGTCGTC TGAAAGGCCT GGCCGAAGTT CGCGGTGTCG AACTGGCGAT CCAGCGCGCT TTCTTTAGCC ATTAA
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Protein sequence | MEQTWRWYGP NDPVSLADVR QAGATGVVTA LHHIPNGEVW SVEEILKRKA IVEDAGLVWS VVESVPIHED IKTHTGNYEQ WIANYQQTLR NLAQCGIRTV CYNFMPVLDW TRTDLEYVLP DGSKALRFDQ IEFAAFEMHI LKRPGAEADY TEEEIAQAAE RFATMSDEDK ARLTRNIIAG LPGAEEGYTL DQFRKHLELY KDIDKAKLRE NFAVFLKAII PVAEEVGVRM AVHPDDPPRP ILGLPRIVST IEDMQWMVDT VNSMANGFTM CTGSYGVRAD NDLVDMIKQF GPRIYFTHLR STMREDNPKT FHEAAHLNGD VDMYEVVKAI VEEEHRRKAE GKEDLIPMRP DHGHQMLDDL KKKTNPGYSA IGRLKGLAEV RGVELAIQRA FFSH
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