Gene ECH74115_5828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5828 
SymboluxuA 
ID6971872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp5480106 
End bp5481290 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content54% 
IMG OID643389455 
Productmannonate dehydratase 
Protein accessionYP_002273847 
Protein GI209398734 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1312] D-mannonate dehydratase 
TIGRFAM ID[TIGR00695] mannonate dehydratase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.153738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGA CCTGGCGCTG GTACGGCCCA AACGATCCGG TTTCTTTAGC TGATGTCCGT 
CAGGCGGGCG CAACTGGCGT GGTTACCGCG CTGCACCATA TCCCGAACGG CGAAGTATGG
TCCGTAGAAG AGATCCTCAA ACGCAAGGCG ATCGTTGAAG ACGCAGGCCT GGTGTGGTCT
GTCGTAGAAA GCGTACCAAT TCACGAAGAT ATCAAAACCC ACACTGGCAA CTATGAGCAG
TGGATCGCTA ACTATCAGCA GACTCTGCGC AACCTGGCGC AGTGCGGCAT TCGCACCGTG
TGCTACAACT TCATGCCGGT GCTCGACTGG ACCCGTACTG ACCTCGAATA CGTGCTGCCA
GACGGCTCCA AAGCTCTGCG CTTCGACCAG ATCGAATTCG CTGCATTCGA AATGCATATC
CTGAAACGTC CAGGCGCGGA AGCGGATTAC ACCGAAGAAG AAATTGCTCA GGCAGCTGAA
CGCTTCGCCA CTATGAGCGA TGAAGACAAA GCGCGTCTGA CCCGTAACAT CATCGCTGGT
CTGCCAGGTG CGGAAGAAGG GTACACCCTC GACCAGTTCC GTAAGCACCT GGAGCTGTAC
AAAGATATCG ACAAAGCCAA ACTGCGCGAA AACTTTGCTG TCTTCCTGAA AGCGATTATT
CCGGTTGCCG AAGAAGTTGG CGTCCGTATG GCTGTTCACC CGGACGATCC GCCGCGCCCG
ATCCTCGGCC TGCCGCGCAT TGTTTCCACC ATTGAAGATA TGCAGTGGAT GGTTGATACC
GTAAACAGCA TGGCGAACGG TTTCACCATG TGCACCGGTT CCTACGGCGT GCGTGCTGAC
AACGATTTGG TTGATATGAT CAAGCAGTTC GGTCCGCGTA TTTACTTCAC CCATCTGCGC
TCCACCATGC GTGAAGATAA CCCGAAAACC TTCCACGAAG CGGCGCACCT GAACGGTGAC
GTTGATATGT ACGAAGTGGT GAAAGCGATT GTTGAAGAAG AACACCGTCG TAAAGCGGAA
GGCAAAGAAG ACCTGATCCC GATGCGTCCG GACCACGGTC ATCAGATGCT GGACGACCTG
AAGAAGAAAA CCAACCCTGG TTACTCCGCA ATTGGTCGTC TGAAAGGCCT GGCCGAAGTT
CGCGGTGTCG AACTGGCGAT CCAGCGCGCT TTCTTTAGCC ATTAA
 
Protein sequence
MEQTWRWYGP NDPVSLADVR QAGATGVVTA LHHIPNGEVW SVEEILKRKA IVEDAGLVWS 
VVESVPIHED IKTHTGNYEQ WIANYQQTLR NLAQCGIRTV CYNFMPVLDW TRTDLEYVLP
DGSKALRFDQ IEFAAFEMHI LKRPGAEADY TEEEIAQAAE RFATMSDEDK ARLTRNIIAG
LPGAEEGYTL DQFRKHLELY KDIDKAKLRE NFAVFLKAII PVAEEVGVRM AVHPDDPPRP
ILGLPRIVST IEDMQWMVDT VNSMANGFTM CTGSYGVRAD NDLVDMIKQF GPRIYFTHLR
STMREDNPKT FHEAAHLNGD VDMYEVVKAI VEEEHRRKAE GKEDLIPMRP DHGHQMLDDL
KKKTNPGYSA IGRLKGLAEV RGVELAIQRA FFSH