Gene ECH74115_5703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5703 
Symbol 
ID6971392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp5343202 
End bp5344827 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content55% 
IMG OID643389336 
Productisovaleryl CoA dehydrogenase 
Protein accessionYP_002273729 
Protein GI209399702 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACTGGC AAACTCACAC CGTTTTTAAT CAACCTATAC CATTAAATAA CAGCAACTTA 
TACCTGTCTG ATGGCGCGCT TTGCGAAGCG GTAACGCGTG AAGGTGCTGG CTGGGATAGC
GATTTTCTAG CCAGTATTGG TCAGCAGTTA GGAACGGCTG AATCCCTTGA ACTGGGGCGG
CTGGCGAATG TGAATCCGCC TGAACTGTTG CGCTACGATG CGCAAGGACG CCGTCTGGAC
GATGTGCGTT TTCACCCCGC CTGGCACCTG CTGATGCAGG CACTATGTAC CAATCGGGTG
CACAATCTTG CCTGGGAAGA AGACGCTCGC TCCGGCGCAT TTGTGGCGCG CGCGGCGCGT
TTTATGTTGC ACGCACAGGT TGAGGCGGGG TCGTTATGTC CGATAACCAT GACCTTTGCC
GCCACGCCAT TGTTGTTACA GATGTTACCC GCGCCGTTTC AGGACTGGAC CACACCGCTG
TTGAGCGATC GCTACGATTC TCACTTATTG CCAGGTGGGC AAAAACGCGG TTTGTTGATT
GGCATGGGAA TGACGGAAAA GCAGGGCGGT TCCGATGTCA TGAGCAACAC CACCCGCGCA
GAGCGTCTGG AGGATGGCTC TTATCGGCTG GTGGGGCATA AATGGTTTTT CTCAGTTCCG
CAAAGCGATG CGCATCTGGT GCTGGCGCAG ACCGCGGGCG GTTTGTCCTG CTTTTTTGTG
CCGCGCTTTT TGCCTGACGG GCAACGCAAC GCGATTCGCC TCGAGCGGCT GAAAGATAAG
CTGGGTAATC GCTCTAACGC CAGTTGTGAA GTGGAGTTTC AGGATGCCAT TGGCTGGTTA
TTGGGGCAGG AAGGGGAAGG AATTCGTCTG ATCCTGAAAA TGGGGGGGAT GACGCGTTTT
GATTGCGCCC TGGGTAGCCA TGCCATGATG CGCCGTGCGT TCTCGCTGGC GATTTATCAT
GCGCATCAAC GCCATGTTTT TGGTAATCCA TTGATCCAAC AGCCCCTTAT GCGTCATGTC
TTAAGTCGCA TGGCACTTCA GCTTGAAGGG CAAACGGCGT TGCTGTTTCG TCTTGCGCGA
GCGTGGGACC GGCGCGCCGA TGCCAAAGAA GCTCTGTGGG CGCGTTTATT TACGCCTGCG
GCAAAATTTG TGATCTGCAA ACGAGGTATG CCGTTTGTGG CCGAAGCGAT GGAGGTGCTG
GGCGGCATTG GTTATTGCGA GGAGAGCGAG CTGCCGCGGC TTTACCGGGA GATGCCGGTA
AACAGTATTT GGGAAGGTTC CGGCAATATT ATGTGCCTGG ATGTGCTGCG CGTTCTCAAT
AAGCAAGCGG GCGTATACGA CTTATTGTCG GAAGCATTTG TAGAAGTGAA AGGGCAGGAT
CGCTATTTTG ATTGCGCGGT TCGTCGTTTA CAGCAGCAGC TGCGTAAGCC AGCTGAAGAA
CTGGGGCGAG AGATTACTCA TCAGCTATTC CTGCTGGGCT GCGGTGCGCA AATGTTGAAA
TATGCTTCTC CGCCAATGGC GCAGGCGTGG TGTCAGGTGA TGTTAGATAC GCGCGGCGGC
GTACGGTTGT CAGAGCAGAT CCAGAATGAT TTATTGCTGC GGGCGACGGG GGGAGTGTGT
GTGTAA
 
Protein sequence
MHWQTHTVFN QPIPLNNSNL YLSDGALCEA VTREGAGWDS DFLASIGQQL GTAESLELGR 
LANVNPPELL RYDAQGRRLD DVRFHPAWHL LMQALCTNRV HNLAWEEDAR SGAFVARAAR
FMLHAQVEAG SLCPITMTFA ATPLLLQMLP APFQDWTTPL LSDRYDSHLL PGGQKRGLLI
GMGMTEKQGG SDVMSNTTRA ERLEDGSYRL VGHKWFFSVP QSDAHLVLAQ TAGGLSCFFV
PRFLPDGQRN AIRLERLKDK LGNRSNASCE VEFQDAIGWL LGQEGEGIRL ILKMGGMTRF
DCALGSHAMM RRAFSLAIYH AHQRHVFGNP LIQQPLMRHV LSRMALQLEG QTALLFRLAR
AWDRRADAKE ALWARLFTPA AKFVICKRGM PFVAEAMEVL GGIGYCEESE LPRLYREMPV
NSIWEGSGNI MCLDVLRVLN KQAGVYDLLS EAFVEVKGQD RYFDCAVRRL QQQLRKPAEE
LGREITHQLF LLGCGAQMLK YASPPMAQAW CQVMLDTRGG VRLSEQIQND LLLRATGGVC
V