Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5703 |
Symbol | |
ID | 6971392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 5343202 |
End bp | 5344827 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643389336 |
Product | isovaleryl CoA dehydrogenase |
Protein accession | YP_002273729 |
Protein GI | 209399702 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCACTGGC AAACTCACAC CGTTTTTAAT CAACCTATAC CATTAAATAA CAGCAACTTA TACCTGTCTG ATGGCGCGCT TTGCGAAGCG GTAACGCGTG AAGGTGCTGG CTGGGATAGC GATTTTCTAG CCAGTATTGG TCAGCAGTTA GGAACGGCTG AATCCCTTGA ACTGGGGCGG CTGGCGAATG TGAATCCGCC TGAACTGTTG CGCTACGATG CGCAAGGACG CCGTCTGGAC GATGTGCGTT TTCACCCCGC CTGGCACCTG CTGATGCAGG CACTATGTAC CAATCGGGTG CACAATCTTG CCTGGGAAGA AGACGCTCGC TCCGGCGCAT TTGTGGCGCG CGCGGCGCGT TTTATGTTGC ACGCACAGGT TGAGGCGGGG TCGTTATGTC CGATAACCAT GACCTTTGCC GCCACGCCAT TGTTGTTACA GATGTTACCC GCGCCGTTTC AGGACTGGAC CACACCGCTG TTGAGCGATC GCTACGATTC TCACTTATTG CCAGGTGGGC AAAAACGCGG TTTGTTGATT GGCATGGGAA TGACGGAAAA GCAGGGCGGT TCCGATGTCA TGAGCAACAC CACCCGCGCA GAGCGTCTGG AGGATGGCTC TTATCGGCTG GTGGGGCATA AATGGTTTTT CTCAGTTCCG CAAAGCGATG CGCATCTGGT GCTGGCGCAG ACCGCGGGCG GTTTGTCCTG CTTTTTTGTG CCGCGCTTTT TGCCTGACGG GCAACGCAAC GCGATTCGCC TCGAGCGGCT GAAAGATAAG CTGGGTAATC GCTCTAACGC CAGTTGTGAA GTGGAGTTTC AGGATGCCAT TGGCTGGTTA TTGGGGCAGG AAGGGGAAGG AATTCGTCTG ATCCTGAAAA TGGGGGGGAT GACGCGTTTT GATTGCGCCC TGGGTAGCCA TGCCATGATG CGCCGTGCGT TCTCGCTGGC GATTTATCAT GCGCATCAAC GCCATGTTTT TGGTAATCCA TTGATCCAAC AGCCCCTTAT GCGTCATGTC TTAAGTCGCA TGGCACTTCA GCTTGAAGGG CAAACGGCGT TGCTGTTTCG TCTTGCGCGA GCGTGGGACC GGCGCGCCGA TGCCAAAGAA GCTCTGTGGG CGCGTTTATT TACGCCTGCG GCAAAATTTG TGATCTGCAA ACGAGGTATG CCGTTTGTGG CCGAAGCGAT GGAGGTGCTG GGCGGCATTG GTTATTGCGA GGAGAGCGAG CTGCCGCGGC TTTACCGGGA GATGCCGGTA AACAGTATTT GGGAAGGTTC CGGCAATATT ATGTGCCTGG ATGTGCTGCG CGTTCTCAAT AAGCAAGCGG GCGTATACGA CTTATTGTCG GAAGCATTTG TAGAAGTGAA AGGGCAGGAT CGCTATTTTG ATTGCGCGGT TCGTCGTTTA CAGCAGCAGC TGCGTAAGCC AGCTGAAGAA CTGGGGCGAG AGATTACTCA TCAGCTATTC CTGCTGGGCT GCGGTGCGCA AATGTTGAAA TATGCTTCTC CGCCAATGGC GCAGGCGTGG TGTCAGGTGA TGTTAGATAC GCGCGGCGGC GTACGGTTGT CAGAGCAGAT CCAGAATGAT TTATTGCTGC GGGCGACGGG GGGAGTGTGT GTGTAA
|
Protein sequence | MHWQTHTVFN QPIPLNNSNL YLSDGALCEA VTREGAGWDS DFLASIGQQL GTAESLELGR LANVNPPELL RYDAQGRRLD DVRFHPAWHL LMQALCTNRV HNLAWEEDAR SGAFVARAAR FMLHAQVEAG SLCPITMTFA ATPLLLQMLP APFQDWTTPL LSDRYDSHLL PGGQKRGLLI GMGMTEKQGG SDVMSNTTRA ERLEDGSYRL VGHKWFFSVP QSDAHLVLAQ TAGGLSCFFV PRFLPDGQRN AIRLERLKDK LGNRSNASCE VEFQDAIGWL LGQEGEGIRL ILKMGGMTRF DCALGSHAMM RRAFSLAIYH AHQRHVFGNP LIQQPLMRHV LSRMALQLEG QTALLFRLAR AWDRRADAKE ALWARLFTPA AKFVICKRGM PFVAEAMEVL GGIGYCEESE LPRLYREMPV NSIWEGSGNI MCLDVLRVLN KQAGVYDLLS EAFVEVKGQD RYFDCAVRRL QQQLRKPAEE LGREITHQLF LLGCGAQMLK YASPPMAQAW CQVMLDTRGG VRLSEQIQND LLLRATGGVC V
|
| |