| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5320 |
|---|
| Symbol | |
|---|
| ID | 6967929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 4961161 |
|---|
| End bp | 4962426 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643388981 |
|---|
| Product | transporter, major facilitator family |
|---|
| Protein accession | YP_002273390 |
|---|
| Protein GI | 209396239 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.581076 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.378409 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACGA AAAAGAAATG GGCGTTATTT AGTCTATTAA CACTGTGTGG CGGTACAATT
TATAAATTAC CGTCGCTGAA AGATGCGTTT TATATCCCGA TGCAGGAATA TTTCCATTTG
ACCAATGGTC AAATTGGTAA TGCTATGTCG GTAAACTCAT TTGTTACCAC AGTGGGCTTT
TTTCTGTCTA TTTATTTTGC CGATAAACTA CCGCGCAGAT ACACCATGTC ATTCTCACTC
ATTGCGACAG GATTACTGGG TGTTTATTTG ACGACAATGC CGGGGTATTG GGGCATCCTC
TTTGTCTGGG CGCTATTTGG CGTTACTTGC GACATGATGA ACTGGCCGGT CTTGCTCAAG
TCGGTAAGTC GATTGGGCAA TAGCGAACAA CAAGGTCGGT TGTTTGGCTT CTTCGAAACA
GGGCGTGGCA TTGTCGATAC CGTGGTGGCA TTTTCTGCGT TGGCAGTATT TACCTGGTTT
GGCAGTGGCT TATTAGGTTT TAAAGCAGGC ATCTGGTTCT ATTCCCTTAT TGTGATTGCC
GTAGGCATTA CTATTTTCTT TGTCCTGAAT GACAAAGAAG AGGCACCGTC CGTTGAGGTG
AAAAAAGAAG ACGGGGCATC GCAAAACACC AGTATGACCT CGGTGCTGAA AGACAAAACT
ATCTGGCTTA TCGCTTTCAA CGTCTTCTTC GTTTACGCGG TTTACTGTGG CCTGACATTC
TTCATTCCAT TCCTGAAAAA CATCTATCTA TTGCCCGTTG CGCTGGTGGG GGCTTACGGC
ATCATTAACC AATACTGTCT GAAAATGATT GGTGGACCGA TTGGTGGCAT GATTTCAGAT
AAAATCCTGA AATCGCCGAG TAAATATCTA TGCTACACCT TTATCATCAG TACCGCTGCG
CTCGTACTGT TGATTATGCT GCCGCACGAA AGTATGCCGG TCTATTTAGG GATGGCATGT
ACGCTGGGCT TTGGCGCGAT AGTCTTTACA CAGCGAGCCG TATTTTTTGC ACCTATCGGC
GAAGCAAAAA TTGCTGAAAA TAAAACAGGC GCGGCGATGG CGTTGGGTAG CTTTATTGGT
TACGCCCCGG CGATGTTCTG CTTCAGTCTG TATGGCTACA TTCTGGATTT AAATCCGGGG
ATTATTGGCT ACAAAATCGT GTTTGGCATT ATGGCCTGCT TCGCATTCTG TGGTGCGGTG
GTTTCCGTAA TGCTGGTTAA GCGTATTAGC CAACGTAAGA AAGAGATGCT GGCGGCTGAA
GCTTAA
|
|---|
| Protein sequence | MLTKKKWALF SLLTLCGGTI YKLPSLKDAF YIPMQEYFHL TNGQIGNAMS VNSFVTTVGF
FLSIYFADKL PRRYTMSFSL IATGLLGVYL TTMPGYWGIL FVWALFGVTC DMMNWPVLLK
SVSRLGNSEQ QGRLFGFFET GRGIVDTVVA FSALAVFTWF GSGLLGFKAG IWFYSLIVIA
VGITIFFVLN DKEEAPSVEV KKEDGASQNT SMTSVLKDKT IWLIAFNVFF VYAVYCGLTF
FIPFLKNIYL LPVALVGAYG IINQYCLKMI GGPIGGMISD KILKSPSKYL CYTFIISTAA
LVLLIMLPHE SMPVYLGMAC TLGFGAIVFT QRAVFFAPIG EAKIAENKTG AAMALGSFIG
YAPAMFCFSL YGYILDLNPG IIGYKIVFGI MACFAFCGAV VSVMLVKRIS QRKKEMLAAE
A
|
|---|
| |