| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5184 |
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| Symbol | rbsD |
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| ID | 6967815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 4829890 |
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| End bp | 4830309 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643388850 |
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| Product | D-ribose pyranase |
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| Protein accession | YP_002273276 |
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| Protein GI | 209397170 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1869] ABC-type ribose transport system, auxiliary component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0516719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.987853 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAAG GCACCGTTCT TAATTCTGAT ATTTCATCGG TGATCTCCCG TCTGGGACAT
ACCGATACGC TGGTGGTGTG TGATGCTGGT TTACCCATCC CCAAAAGTAC AACGCGTATC
GATATGGCAT TAACCCAGGG TGTACCTTCT TTTATGCAGG TGCTGGGCGT CGTCACAAAT
GAAATGCAGG TCGAGGCTGC CATTATCGCG GAAGAGATCA AACACCATAA TCCGCAACTC
CACGAAACGT TGCTCACTCA CCTTGAGCAG CTGCAAAAAC ACCAGGGAAA TACCATTGAA
ATTCGTTACA CCACGCATGA ACAATTCAAA CAACAAACCG CAGAAAGTCA GGCGGTAATT
CGCAGCGGAG AATGTTCTCC GTATGCGAAT ATCATTCTCT GTGCTGGCGT GACGTTCTGA
|
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| Protein sequence | MKKGTVLNSD ISSVISRLGH TDTLVVCDAG LPIPKSTTRI DMALTQGVPS FMQVLGVVTN
EMQVEAAIIA EEIKHHNPQL HETLLTHLEQ LQKHQGNTIE IRYTTHEQFK QQTAESQAVI
RSGECSPYAN IILCAGVTF
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