| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5099 |
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| Symbol | uhpA |
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| ID | 6967960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 4740372 |
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| End bp | 4740962 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643388774 |
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| Product | DNA-binding transcriptional activator UhpA |
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| Protein accession | YP_002273200 |
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| Protein GI | 209398144 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.0828785 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACCG TTGCCCTTAT AGACGATCAC CTCATCGTCC GCTCCGGCTT TGCGCAGTTG
CTGGGGCTGG AACCTGATTT GCAAGTAGTT GCCGAGTTTG GTTCGGGGCG CGAGGCGCTG
GCGGGGCTGC CGGGGCGCGG TGTGCAGGTG TGTATTTGCG ATATCTCCAT GCCCGATATC
TCCGGTCTGG AGCTGCTAAG CCAGCTGCCG AAAGGTATGG CGACAATTAT GCTCTCCGTT
CATGACAGTC CGGCGCTGGT TGAGCAGGCG CTTAACGCGG GGGCGCGTGG CTTTCTCTCC
AAGCGTTGTA GCCCTGACGA ACTGATTGCT GCGGTGCATA CGGTTGCCAC AGGCGGCTGT
TATCTGACGC CGGATATTGC CATTAAACTG GCATCCGGTC GCCAGGACCC ACTAACCAAA
CGTGAACGGC AGGTGGCGGA AAAACTGGCG CAAGGAATGG CGGTGAAAGA GATTGCCGCC
GAACTGGGCT TGTCACCGAA AACGGTACAC GTCCATCGCG CCAATCTGAT GGAAAAACTG
GGCGTCAGTA ACGACGTTGA ACTGGCGCGC CGTATGTTTG ATGGCTGGTG A
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| Protein sequence | MITVALIDDH LIVRSGFAQL LGLEPDLQVV AEFGSGREAL AGLPGRGVQV CICDISMPDI
SGLELLSQLP KGMATIMLSV HDSPALVEQA LNAGARGFLS KRCSPDELIA AVHTVATGGC
YLTPDIAIKL ASGRQDPLTK RERQVAEKLA QGMAVKEIAA ELGLSPKTVH VHRANLMEKL
GVSNDVELAR RMFDGW
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