Gene ECH74115_4928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4928 
Symbol 
ID6967398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4567226 
End bp4567885 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content58% 
IMG OID643388611 
Productputative outer membrane lipoprotein 
Protein accessionYP_002273038 
Protein GI209400986 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.843277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAC GTGTTTATCT TATTGCCGCC GTAGTGAGTG GCGCTCTGGC GGTATCTGGC 
TGCACAACTA ACCCTTACAC CGGCGAACGC GAAGCAGGTA AATCTGCTAT CGGCGCAGGT
CTGGGCTCTC TCGTGGGCGC GGGTATTGGT GCGCTCTCTT CTTCGAAGAA AGATCGCGGT
AAAGGCGCGC TGATTGGCGC AGCAGCAGGC GCAGCTCTGG GCGGCGGCGT GGGTTATTAC
ATGGATGTGC AGGAAGCGAA GCTGCGTGAC AAAATGCGCG GCACTGGTGT TAGCGTAACC
CGCAGCGGGG ATAACATTAT CCTCAATATG CCGAACAATG TGACCTTCGA CAGCAGCAGC
GCAACCCTGA AACCGGCGGG CGCTAACACC CTGACCGGCG TGGCAATGGT GCTGAAAGAG
TATCCGAAAA CGGCGGTTAA CGTGATTGGT TATACTGACA GCACGGGTGG TCACGATCTG
AACATGCGTC TCTCCCAGCA GCGTGCGGAT TCCGTTGCCA GCGCGTTGAT CACCCAGGGC
GTGGACGCCA GCCGCATCCG TACTCAGGGC CTTGGCCCGG CTAACCCAAT CGCCAGCAAC
AGCACCGCAG AAGGTAAGGC GCAAAACCGC CGTGTAGAAA TTACCTTAAG CCCGCTGTAA
 
Protein sequence
MKKRVYLIAA VVSGALAVSG CTTNPYTGER EAGKSAIGAG LGSLVGAGIG ALSSSKKDRG 
KGALIGAAAG AALGGGVGYY MDVQEAKLRD KMRGTGVSVT RSGDNIILNM PNNVTFDSSS
ATLKPAGANT LTGVAMVLKE YPKTAVNVIG YTDSTGGHDL NMRLSQQRAD SVASALITQG
VDASRIRTQG LGPANPIASN STAEGKAQNR RVEITLSPL