| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4871 |
|---|
| Symbol | gadE |
|---|
| ID | 6967403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 4503578 |
|---|
| End bp | 4504105 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 643388560 |
|---|
| Product | transcriptional regulator GadE |
|---|
| Protein accession | YP_002272988 |
|---|
| Protein GI | 209400509 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 0.904835 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTTC TCATGACGAA AGATTCTTTT CTTTTACAGG GCTTTTGGCA GTTGAAAGAT
AATCACGAAA TGATAAAAAT CAATTCCCTG TCAGAGATCA AAAAAGTAGG CAATAAACCC
TTCAAGGTTA TCATTGATAC CTATCACAAT CATATCCTTG ATGAAGAAGC GATTAAATTT
CTGGAGAAAT TAGATGCCGA GAGAATTATT GTTTTGGCAC CTTATCACAT CAGTAAACTA
AAAGCTAAAG CGCCTATTTA TTTTGTTAGC CGCAAAGAAA GTATCAAAAA TCTTCTTGAG
ATTACTTATG GTAAACACTT GCCCCATAAG AATTCACAAT TATGTTTTTC ACATAATCAG
TTCAAAATTA TGCAACTGAT TCTGAAAAAT AAAAATGAAA GCAATATCAC GTCGACGCTC
AATATTTCGC AACAAACATT AAAGATTCAG AAATTCAACA TTATGTACAA GCTGAAACTA
AGACGTATGA GCGACATCGT CACCCTGGGT ATCACATCTT ATTTTTAG
|
|---|
| Protein sequence | MIFLMTKDSF LLQGFWQLKD NHEMIKINSL SEIKKVGNKP FKVIIDTYHN HILDEEAIKF
LEKLDAERII VLAPYHISKL KAKAPIYFVS RKESIKNLLE ITYGKHLPHK NSQLCFSHNQ
FKIMQLILKN KNESNITSTL NISQQTLKIQ KFNIMYKLKL RRMSDIVTLG ITSYF
|
|---|
| |