| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4743 |
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| Symbol | glgX |
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| ID | 6969241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 4388226 |
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| End bp | 4390199 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643388444 |
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| Product | glycogen debranching enzyme |
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| Protein accession | YP_002272872 |
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| Protein GI | 209397714 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAC TCGCCATTGG CAAACCCGCT CCCCTCGGCG CGCATTACGA CGGTCAGGGC
GTCAACTTCA CACTTTTCTC CGCTCATGCC GAGCGGGTAG AACTGTGTGT CTTTGACGCC
AATGGCCAGG AACATCGCTA TGACTTGCCA GGGCACAGTG GCGACATTTG GCACGGTTAT
CTGCCGGATG CGCGCCCGGG TTTGCGTTAT GGTTATCGCG TTCATGGCCC CTGGCAACCC
GCCGAGGGGC ATCGCTTTAA CCCGGCGAAG TTGTTGATTG ATCCTTGCGC GCGGCAAATT
GACGGGGAGT TTAAAGATAA CCCGCTGCTG CACGCCGGTC ATAATGAACC TGACTATCGC
GACAACGCCG CCATTGCGCC GAAATGCGTA GTGGTGGTTG ATCACTATGA CTGGGAAGAT
GATGCCCCGC CGCGCACGCC GTGGGGCAGC ACCATCATTT ATGAAGCCCA TGTTAAAGGA
TTAACGTACC TGCACCCGGA GATCCCGGTC GAGATCCGTG GCACTTATAA AGCCCTCGGG
CATCCGGTGA TGATCAACTA TTTGAAACAA TTGGGCATTA CCGCGCTGGA ACTGCTGCCA
GTGGCGCAGT TTGCCAGTGA ACCACGTCTG CAACGCATGG GGCTAAGTAA CTACTGGGGT
TACAACCCGG TGGCGATGTT TGCGCTGCAT CCGGCGTATG CCTGCTCGCC AGAAACGGCG
CTGCATGAGT TTCGCGATGC AATCAAAGCA CTGCATAAAG CGGGTATCGA AGTCATTCTT
GATATCGTGC TCAACCATAG TGCGGAACTG GACCTCGACG GCCCGTTATT CTCGCTGCGT
GGGATCGACA ACCGTAGCTA TTATTGGATA AGAGAAGACG GCGATTATCA CAACTGGACC
GGTTGTGGCA ACACGCTCAA TTTGAGTCAC CCGGCGGTGG TGGATTATGC CAGCGCCTGC
CTGCGTTATT GGGTAGAAAC CTGCCACGTC GATGGTTTCC GCTTTGATCT GGCGGCAGTC
ATGGGCCGTA CGCCAGAGTT CCGTCAGGAT GCGCCGTTGT TTACCGCTAT CCAGAACTGC
CCGGTGCTCT CGCAGGTGAA GTTAATTGCT GAACCGTGGG ATATCGCTCC TGGTGGTTAT
CAGGTGGGAA ATTTCCCGCC GCTGTTTGCC GAGTGGAACG ATCATTTCCG CGATGCTGCC
CGTCGTTTCT GGCTACATTA TGATTTGCCT CTGGGGGCGT TTGCCGGGCG TTTTGCTGCC
TCCAGCGATG TTTTTAAACG TAATGGTCGT CTGCCGAGTG CCGCGATTAA TCTCGTCACC
GCGCATGACG GTTTTACGCT TCGCGACTGC GTTTGTTTCA ACCATAAACA CAATGAAGCA
AACGGAGAAG AAAATCGCGA CGGGACCAAC AACAATTACA GTAACAATCA TGGTAAAGAA
GGGGTAGGCG GTACCCTTGA CCTGGTTGAA CGGCGGCGCG ACAGCATTCA CGCCCTGTTA
ACAACGTTGT TGCTCTCCCA GGGTACGCCG ATGTTACTGG CCGGTGACGA ACATGGTCAC
AGCCAGCATG GCAATAACAA TGCCTACTGT CAGGATAACC AATTAACCTG GTTGGACTGG
TCGCAGGCAA GCAGTGGTTT AACCGCATTT ACCGCCGCGT TAATCCATCT GCGCAAGCGT
ATTCCCGCTT TGGTGGAGAA TCGCTGGTGG GAAGAAGGCG ACGGCAATGT CCGTTGGCTA
AATCGATATG CTCAACCTTT AAGCACGGAT GAGTGGCAAA ACGGGCCGAA ACAGCTGCAA
ATTCTGCTCT CGGATCGCTT TTTGATCGCA ATTAACGCCA CGCTTGAGGT AACAGAGATT
GTTTTACCTG CTGGGGAGTG GCACGCCATT CCCCCATTCG CTGGAGAGGA TAACCCAGTG
ATTACGGCTG TCTGGCAGGG ACCTGCACAC GGATTGTGTG TGTTCCAGAG ATGA
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| Protein sequence | MTQLAIGKPA PLGAHYDGQG VNFTLFSAHA ERVELCVFDA NGQEHRYDLP GHSGDIWHGY
LPDARPGLRY GYRVHGPWQP AEGHRFNPAK LLIDPCARQI DGEFKDNPLL HAGHNEPDYR
DNAAIAPKCV VVVDHYDWED DAPPRTPWGS TIIYEAHVKG LTYLHPEIPV EIRGTYKALG
HPVMINYLKQ LGITALELLP VAQFASEPRL QRMGLSNYWG YNPVAMFALH PAYACSPETA
LHEFRDAIKA LHKAGIEVIL DIVLNHSAEL DLDGPLFSLR GIDNRSYYWI REDGDYHNWT
GCGNTLNLSH PAVVDYASAC LRYWVETCHV DGFRFDLAAV MGRTPEFRQD APLFTAIQNC
PVLSQVKLIA EPWDIAPGGY QVGNFPPLFA EWNDHFRDAA RRFWLHYDLP LGAFAGRFAA
SSDVFKRNGR LPSAAINLVT AHDGFTLRDC VCFNHKHNEA NGEENRDGTN NNYSNNHGKE
GVGGTLDLVE RRRDSIHALL TTLLLSQGTP MLLAGDEHGH SQHGNNNAYC QDNQLTWLDW
SQASSGLTAF TAALIHLRKR IPALVENRWW EEGDGNVRWL NRYAQPLSTD EWQNGPKQLQ
ILLSDRFLIA INATLEVTEI VLPAGEWHAI PPFAGEDNPV ITAVWQGPAH GLCVFQR
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