Gene ECH74115_4699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4699 
Symbol 
ID6971527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4336709 
End bp4337248 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content55% 
IMG OID643388401 
ProductPilN family protein 
Protein accessionYP_002272829 
Protein GI209399183 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3166] Tfp pilus assembly protein PilN 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0166356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGC CAATTAATTT TTTGCCCTGG CGACAGCAAC GCCGGACCGC TTTTCTTCGT 
TTCTGGTTGC TGATGTTCGT TGCGCCTCTG CTGCTGGCCG TCGGGATAAC GCTAATACTG
CGTCTGACAA GCAGCGCCGA AGCTCGCGTA GACGCCGTTT TGCTTCAGGG GGAACAACAA
CTCGCCCGCA GCTTACAGAT AACCAAACCA CGTTTGCTGG AGCGCCAACA AATTCGTGAG
CAGCGTTTGC AAAGGCAGCG CCAGCGACAA TTTACCCGCG ACTGGCAATC TGCGCTGGAA
GCACTGGCGG CGCTTTTACC CGAGCACGCC TGGCTGACAA CGATAAGCTG GCAGCAGGGA
ACGCTGGAGA TCAAGGGGCT TACAACAAGC ATTACCGCGT TAAACGCACT AGAAACGTCA
CTCCGCCAGG ATGCATCTTT TCATCTCAAT CAGCGGGGGG CCACGCAGCA GGATGCGCAG
GGACGCTGGC AATTTGAGTA TCAGTTAACA AGGAAGGTTA GCGATGAACA TGTTCTTTGA
 
Protein sequence
MNPPINFLPW RQQRRTAFLR FWLLMFVAPL LLAVGITLIL RLTSSAEARV DAVLLQGEQQ 
LARSLQITKP RLLERQQIRE QRLQRQRQRQ FTRDWQSALE ALAALLPEHA WLTTISWQQG
TLEIKGLTTS ITALNALETS LRQDASFHLN QRGATQQDAQ GRWQFEYQLT RKVSDEHVL