Gene ECH74115_4424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4424 
Symbol 
ID6970657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4099391 
End bp4100722 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content50% 
IMG OID643388145 
Productserine transporter family protein 
Protein accessionYP_002272582 
Protein GI209397781 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00814] serine transporter 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0207469 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATTG CATCGAATAA AGGCGTCATT GCAGACGCTT CGACCCCGGC GGGTCGTGCT 
GGAATGAGTG AGAGCGAGTG GCGAGAAGCG ATCAAATTCG ACAGTACTGA CACCGGCTGG
GTGATTATGA GTATCGGGAT GGCGATTGGC GCGGGGATTG TTTTTCTCCC GGTGCAGGTC
GGTTTGATGG GATTGTGGGT ATTTTTGCTC TCATCGGTGA TTGGTTACCC GGCAATGTAT
CTGTTTCAGC GGTTGTTTAT TAATACGCTG GCAGAATCAC CAGAATGTAA AGATTACCCG
AGCGTCATTA GCGGTTATTT AGGTAAAAAC TGGGGCATCC TGTTAGGTGC ACTCTATTTC
GTAATGCTGG TGATTTGGAT GTTCGTCTAT TCCACCGCCA TCACCAACGA TAGTGCTTCC
TACCTGCATA CCTTCGGCGT GACGGAAGGG TTGCTGTCAG ACAGTCCCTT TTATGGTCTG
GTACTGATTT GCATTCTGGT GGCGATCTCT TCACGCGGCG AGAAATTGTT ATTCAAAATT
TCGACTGGCA TGGTGCTGAC CAAGCTGCTG GTGGTCGCGG CGCTGGGCGT GTCGATGGTG
GGAATGTGGC ATCTGTATAA CGTCGGTTCG CTACCGCCGC TGGGGCTGCT GGTGAAAAAC
GCTATTATTA CGCTGCCGTT TACCCTGACG TCGATTCTGT TTATCCAGAC GTTAAGCCCG
ATGGTGATCT CTTATCGCTC GCGGGAAAAA TCGATTGAAG TAGCGCGGCA TAAAGCATTG
CGGGCAATGA ATATCGCGTT TGGCATTTTG TTTATCATCG TCTTTTTCTA CGCCGTGTCG
TTCACGCTGG CGATGGGACA TGACGAAGCG GTAAAAGCCT ACGAGCAGAA TATTTCCGCG
CTGGCGATTG CCGCACAGTT TATTAGCGGT GACGGCGCAG CGTGGGTGAA AGTGGTCAGC
GTCATTCTCA ATATCTTTGC TGTCATGACT GCATTCTTTG GCGTCTATTT AGGTTTTCGC
GAAGCAACGC AAGGGATCGT AATGAACATC CTGCGTCGCA AGATGCCTGC CGAGAAGATT
AACGAAAATC TTGTTCAGCG CGGCATCATG ATTTTCGCCA TTTTGCTGGC CTGGAGCGCC
ATCGTACTGA ACGCACCGGT GTTGAGCTTC ACCTCTATCT GTAGCCCGAT TTTCGGCTTG
GTAGGGTGCC TGATCCCGGC GTGGCTGGTT TACAAAGTAC CGGCATTGCA CAAATACAAA
GGGATGTCTC TGTACCTGAT TATCGTCACT GGTTTGTTGC TTTGTGTTTC TCCGTTCCTG
GCATTTTCTT GA
 
Protein sequence
MEIASNKGVI ADASTPAGRA GMSESEWREA IKFDSTDTGW VIMSIGMAIG AGIVFLPVQV 
GLMGLWVFLL SSVIGYPAMY LFQRLFINTL AESPECKDYP SVISGYLGKN WGILLGALYF
VMLVIWMFVY STAITNDSAS YLHTFGVTEG LLSDSPFYGL VLICILVAIS SRGEKLLFKI
STGMVLTKLL VVAALGVSMV GMWHLYNVGS LPPLGLLVKN AIITLPFTLT SILFIQTLSP
MVISYRSREK SIEVARHKAL RAMNIAFGIL FIIVFFYAVS FTLAMGHDEA VKAYEQNISA
LAIAAQFISG DGAAWVKVVS VILNIFAVMT AFFGVYLGFR EATQGIVMNI LRRKMPAEKI
NENLVQRGIM IFAILLAWSA IVLNAPVLSF TSICSPIFGL VGCLIPAWLV YKVPALHKYK
GMSLYLIIVT GLLLCVSPFL AFS