Gene ECH74115_4215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4215 
Symbol 
ID6967709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3905866 
End bp3906651 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content49% 
IMG OID643387955 
Productmethylmalonyl-CoA decarboxylase 
Protein accessionYP_002272394 
Protein GI209400369 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTATC AGTATGTTAA CGTTGTCACT ATCAACAAAG TGGCGGTCAT TGAGTTTAAC 
TATGGCCGAA AACTTAATGC CTTAAGTAAA GTCTTTATTG ATGATCTTAT GCAGGCGTTA
AGCGATCTCA ACCGGCCGGA AATTCGCTGT ATCATTTTGC GCGCGCCGAG TGGATCCAAA
GTCTTCTCCG CAGGTCACGA TATTCACGAA CTGCCGTCTG GCGGTCGCGA TCCGCTCTCC
TATGATGATC CATTGCGTCA AATCACCCGC ATGATCCAAA AATTCCCGAA ACCGATTATT
TCGATGGTGG AAGGTAGTGT TTGGGGTGGC GCATTTGAAA TGATCATGAG TTCCGATCTG
ATTATCGCCG CCAGTACCTC AACCTTCTCA ATGACGCCTG TAAACCTCGG CGTCCCGTAT
AACCTGGTCG GCATTCACAA CCTGACCCGC GACGCGGGCT TCCACATTGT CAAAGAGCTG
ATTTTTACCG CTTCGCCCAT CACCGCCCAG CGCGCGCTGG CTGTCGGCAT CCTCAACCAT
GTTGTGGAAG TGGAAGAACT GGAAGATTTC ACCTTACAAA TGGCGCACCA CATCTCTGAG
AAAGCGCCGT TAGCCATTGC CGTTATCAAA GAAGAGCTGC GTGTACTGGG CGAAGCACAC
ACCATGAACT CCGATGAATT TGAACGTATT CAGGGGATGC GCCGCGCGGT TTATGACAGC
GAAGATTACC AGGAAGGGAT GAACGCTTTC CTCGAAAAAC GTAAACCTAA TTTCGTTGGT
CATTAA
 
Protein sequence
MSYQYVNVVT INKVAVIEFN YGRKLNALSK VFIDDLMQAL SDLNRPEIRC IILRAPSGSK 
VFSAGHDIHE LPSGGRDPLS YDDPLRQITR MIQKFPKPII SMVEGSVWGG AFEMIMSSDL
IIAASTSTFS MTPVNLGVPY NLVGIHNLTR DAGFHIVKEL IFTASPITAQ RALAVGILNH
VVEVEELEDF TLQMAHHISE KAPLAIAVIK EELRVLGEAH TMNSDEFERI QGMRRAVYDS
EDYQEGMNAF LEKRKPNFVG H