| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4133 |
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| Symbol | eprI |
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| ID | 6970244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 3824684 |
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| End bp | 3824923 |
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| Gene Length | 240 bp |
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| Protein Length | 79 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643387886 |
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| Product | type III secretion apparatus needle protein |
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| Protein accession | YP_002272326 |
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| Protein GI | 209399756 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02105] type III secretion apparatus needle protein |
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| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.00116723 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCAGATT GGAATGGTTA TATTATGGAC ATCAGCAAAC AATTTGATCA GGGCGTTGAT
GATCTGAACC AGCAAGTTGA AAAAGCGTTG GAGGATTTAG CAACCAATCC TTCCGACCCG
AAATTCCTTG CCGAATATCA AAGTGCATTA GCTGAGTATA CATTATATCG AAATGCGCAA
TCTAACGTTG TAAAAGCGTA TAAAGATCTT GATTCGGCAA TCATACAAAA CTTCCGCTAA
|
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| Protein sequence | MADWNGYIMD ISKQFDQGVD DLNQQVEKAL EDLATNPSDP KFLAEYQSAL AEYTLYRNAQ
SNVVKAYKDL DSAIIQNFR
|
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