Gene ECH74115_3888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3888 
Symbol 
ID6970425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3595841 
End bp3597055 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content38% 
IMG OID643387666 
Producthypothetical protein 
Protein accessionYP_002272115 
Protein GI209399981 
COG category[S] Function unknown 
COG ID[COG5373] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATG TTAATCAATC ATATTTCAGA TATGGCGATA AACATAAGGA TGGATGTGGT 
ATTCATGATC CAAGATATAA AAACAATCAT ACTTCAAATG ACGAAAGAAA ACATAATTCG
CCACCTGCTC CGGTTATATC ACTTTTAAAA ATTGATGTGA AACCAAGAGG TGGTGTTAAA
AATGCCAGAA ATATTAAAAA TGAAAATCAC AAGGATGAAA AAAAAGGTAA TGAACATCCT
GTATCTTCAT CAAGTATTAA GCCAGTCGTT GACTATTACA TAAATAATAG CAATCATAAT
GAACAGCTAT CAATCCCTCC ATATGGCACG CGATCTTATA AAGATACATT TCAACTTATT
TTTTACAAAA ACAACATACG TTATTACAAA CCTGCTATTT ATTATGGTGT AGCCCAGTCT
AATATTCGTC TGCATGAAGA TTCAGATAAA CATTGTATTA CTTTCCTCGC AAGGGATAAG
AAAACCCAAA AACCATTTAC GCTTGAAATT GATGTTTCTG ACTGGAATAA AAGTCAGAAG
GATGTGTTTT GGAAGGAATA TGAAAAGCAA AGGAAGGAAG CTGATAGGTA TTATAAGGGG
CTTAAAGATA AAAGGAATGC TAAAAAATAC TTGACGGTTT TCTTTTTTGG GATGCCGGAT
GAAAATGATA AGTTTCTATT TAAGACAAAC CACTTTAAAT TAGTATATGT GGCTTTCTTG
GGTAAATTTG AAAGCTCATA TAATGATAGT AATTATTACA TTGAAAATGA TCTGTCTGTA
TCATCATTGA ATGAACAACC CATTTCATTA TCTGATATAG ACCATAAAAA TCATGAATAT
AATATTGAAA CTTCATTAGA TTTTAGTTCT CCTTTGCCAG AGCCAGAGCC AGAGCCAGAG
CCAGAGCCAG AGCCAGAGCC AGAGCCAGAG CCAGAGCCAG AGCCAGAGCC AGAGCCAGAG
CCAGAGCCAG AGCCAGAGCC AGAGCCAGAG CCAGAGCCAG AGCCAGAGCC AGAGCCAGAG
CCAGAGCCAG AGCCAGAGCC AGAGCCAGAG CCAGAGCCAG AGCCAGAGCC AGAGCCAGAG
CCAGAGCCAG AGCCAGAGCC AGAGCCAGAG CCAGAGCCAA TAAGATCCTC TTTAAAGGAA
AATACTGAGA CTGTAGAAAT GAACAGTAAA GTTTGGGGGA GGCTGAAAAA GATAATCACT
TTCTTTAAAA AGTGA
 
Protein sequence
MKHVNQSYFR YGDKHKDGCG IHDPRYKNNH TSNDERKHNS PPAPVISLLK IDVKPRGGVK 
NARNIKNENH KDEKKGNEHP VSSSSIKPVV DYYINNSNHN EQLSIPPYGT RSYKDTFQLI
FYKNNIRYYK PAIYYGVAQS NIRLHEDSDK HCITFLARDK KTQKPFTLEI DVSDWNKSQK
DVFWKEYEKQ RKEADRYYKG LKDKRNAKKY LTVFFFGMPD ENDKFLFKTN HFKLVYVAFL
GKFESSYNDS NYYIENDLSV SSLNEQPISL SDIDHKNHEY NIETSLDFSS PLPEPEPEPE
PEPEPEPEPE PEPEPEPEPE PEPEPEPEPE PEPEPEPEPE PEPEPEPEPE PEPEPEPEPE
PEPEPEPEPE PEPIRSSLKE NTETVEMNSK VWGRLKKIIT FFKK